Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GZH91_RS01505 | Genome accession | NZ_AP021884 |
| Coordinates | 297954..298982 (-) | Length | 342 a.a. |
| NCBI ID | WP_147072139.1 | Uniprot ID | A0A512L6Z1 |
| Organism | Sulfuriferula plumbiphila strain Gro7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 292954..303982
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZH91_RS01475 (SFPGR_02960) | ccoS | 293124..293309 (+) | 186 | WP_147072151.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
| GZH91_RS01480 (SFPGR_02970) | - | 293583..293882 (-) | 300 | WP_147072149.1 | helix-turn-helix domain-containing protein | - |
| GZH91_RS01485 (SFPGR_02980) | - | 293895..295184 (-) | 1290 | WP_147072147.1 | type II toxin-antitoxin system HipA family toxin | - |
| GZH91_RS01490 (SFPGR_02990) | rpoH | 295471..296319 (-) | 849 | WP_147072145.1 | RNA polymerase sigma factor RpoH | - |
| GZH91_RS01495 (SFPGR_03000) | ftsX | 296399..297307 (-) | 909 | WP_147072143.1 | permease-like cell division protein FtsX | - |
| GZH91_RS01500 (SFPGR_03010) | ftsE | 297304..297957 (-) | 654 | WP_147072141.1 | cell division ATP-binding protein FtsE | - |
| GZH91_RS01505 (SFPGR_03020) | pilA | 297954..298982 (-) | 1029 | WP_147072139.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| GZH91_RS01510 (SFPGR_03030) | - | 299077..300456 (+) | 1380 | WP_147072137.1 | pitrilysin family protein | - |
| GZH91_RS01515 (SFPGR_03040) | - | 300456..301763 (+) | 1308 | WP_147072135.1 | pitrilysin family protein | - |
| GZH91_RS01520 (SFPGR_03050) | rsmD | 301760..302335 (+) | 576 | WP_147072133.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| GZH91_RS01525 (SFPGR_03060) | coaD | 302328..302816 (+) | 489 | WP_147072131.1 | pantetheine-phosphate adenylyltransferase | - |
| GZH91_RS01530 (SFPGR_03070) | - | 302828..303082 (+) | 255 | WP_147072129.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
Sequence
Protein
Download Length: 342 a.a. Molecular weight: 36532.87 Da Isoelectric Point: 7.3580
>NTDB_id=75255 GZH91_RS01505 WP_147072139.1 297954..298982(-) (pilA) [Sulfuriferula plumbiphila strain Gro7]
MFSFFKKSGDKPIPAETAPTPTAPAAAETPAGPAYQLSWAQRLKQGLSRTREQLGKQLTSLFSRGGKIDADLYDELETIL
LTADVGVDASQYLLDSLRQRVKKDRLTDAAQLQSALHDALCTLLAPLEQALDVSTHKPYVIMLAGVNGAGKTTTIGKLAK
YYQAQGKSVLLAAGDTFRAAAREQLMVWGERNNVAVIAQDGGDSAAVIFDAIAAARARGIDIVLADTAGRLPTQLNLMEE
IRKVRRVIRKAEPTAPHEVLLVLDANTGQNAVTQVTAFDDALNVTGLVLTKLDGTAKGGVIAAIAKTRPRPIRFIGVGEG
LDDLRPFVAHDFVDALFEAPAP
MFSFFKKSGDKPIPAETAPTPTAPAAAETPAGPAYQLSWAQRLKQGLSRTREQLGKQLTSLFSRGGKIDADLYDELETIL
LTADVGVDASQYLLDSLRQRVKKDRLTDAAQLQSALHDALCTLLAPLEQALDVSTHKPYVIMLAGVNGAGKTTTIGKLAK
YYQAQGKSVLLAAGDTFRAAAREQLMVWGERNNVAVIAQDGGDSAAVIFDAIAAARARGIDIVLADTAGRLPTQLNLMEE
IRKVRRVIRKAEPTAPHEVLLVLDANTGQNAVTQVTAFDDALNVTGLVLTKLDGTAKGGVIAAIAKTRPRPIRFIGVGEG
LDDLRPFVAHDFVDALFEAPAP
Nucleotide
Download Length: 1029 bp
>NTDB_id=75255 GZH91_RS01505 WP_147072139.1 297954..298982(-) (pilA) [Sulfuriferula plumbiphila strain Gro7]
GTGTTTAGTTTCTTCAAGAAATCCGGCGACAAGCCCATCCCTGCCGAAACCGCGCCCACGCCGACTGCACCGGCAGCCGC
TGAGACGCCTGCCGGACCTGCGTACCAGTTATCCTGGGCGCAACGTCTGAAGCAGGGTTTGAGCCGCACCCGGGAACAAC
TGGGCAAGCAACTGACCAGCCTGTTTTCACGCGGCGGCAAGATAGACGCAGACCTGTACGACGAACTGGAAACCATCCTG
CTCACTGCCGATGTGGGCGTTGATGCCAGCCAGTATCTGCTCGACAGCCTGCGCCAGCGGGTAAAAAAAGACCGGCTTAC
CGACGCCGCCCAGCTGCAGTCTGCCCTGCACGATGCACTGTGCACGCTGCTCGCACCGCTCGAACAGGCATTGGATGTAA
GCACCCACAAACCCTATGTGATCATGCTGGCGGGAGTGAATGGCGCAGGCAAAACCACCACCATCGGCAAGCTGGCCAAA
TATTACCAGGCGCAGGGCAAATCGGTGCTGCTGGCGGCGGGCGACACATTTCGCGCCGCCGCGCGCGAGCAACTGATGGT
GTGGGGCGAGCGTAACAATGTGGCGGTGATTGCGCAGGACGGCGGCGATTCGGCGGCGGTGATTTTCGATGCCATTGCCG
CCGCCCGCGCCCGCGGCATTGACATCGTGCTGGCCGACACTGCCGGCCGCCTGCCCACCCAGCTCAACCTGATGGAGGAA
ATCCGCAAAGTCAGGCGCGTGATCCGGAAAGCTGAACCCACGGCCCCGCATGAAGTATTGCTGGTGCTCGACGCCAACAC
CGGACAAAACGCGGTAACCCAGGTAACAGCGTTTGACGATGCACTGAACGTCACCGGCCTGGTGCTCACCAAGCTCGACG
GCACGGCCAAGGGCGGGGTGATTGCAGCCATCGCCAAAACCCGCCCGCGCCCGATCCGCTTTATCGGGGTGGGCGAGGGC
CTGGATGATTTGCGCCCGTTTGTGGCACATGATTTTGTTGATGCACTATTCGAGGCACCGGCGCCATGA
GTGTTTAGTTTCTTCAAGAAATCCGGCGACAAGCCCATCCCTGCCGAAACCGCGCCCACGCCGACTGCACCGGCAGCCGC
TGAGACGCCTGCCGGACCTGCGTACCAGTTATCCTGGGCGCAACGTCTGAAGCAGGGTTTGAGCCGCACCCGGGAACAAC
TGGGCAAGCAACTGACCAGCCTGTTTTCACGCGGCGGCAAGATAGACGCAGACCTGTACGACGAACTGGAAACCATCCTG
CTCACTGCCGATGTGGGCGTTGATGCCAGCCAGTATCTGCTCGACAGCCTGCGCCAGCGGGTAAAAAAAGACCGGCTTAC
CGACGCCGCCCAGCTGCAGTCTGCCCTGCACGATGCACTGTGCACGCTGCTCGCACCGCTCGAACAGGCATTGGATGTAA
GCACCCACAAACCCTATGTGATCATGCTGGCGGGAGTGAATGGCGCAGGCAAAACCACCACCATCGGCAAGCTGGCCAAA
TATTACCAGGCGCAGGGCAAATCGGTGCTGCTGGCGGCGGGCGACACATTTCGCGCCGCCGCGCGCGAGCAACTGATGGT
GTGGGGCGAGCGTAACAATGTGGCGGTGATTGCGCAGGACGGCGGCGATTCGGCGGCGGTGATTTTCGATGCCATTGCCG
CCGCCCGCGCCCGCGGCATTGACATCGTGCTGGCCGACACTGCCGGCCGCCTGCCCACCCAGCTCAACCTGATGGAGGAA
ATCCGCAAAGTCAGGCGCGTGATCCGGAAAGCTGAACCCACGGCCCCGCATGAAGTATTGCTGGTGCTCGACGCCAACAC
CGGACAAAACGCGGTAACCCAGGTAACAGCGTTTGACGATGCACTGAACGTCACCGGCCTGGTGCTCACCAAGCTCGACG
GCACGGCCAAGGGCGGGGTGATTGCAGCCATCGCCAAAACCCGCCCGCGCCCGATCCGCTTTATCGGGGTGGGCGAGGGC
CTGGATGATTTGCGCCCGTTTGTGGCACATGATTTTGTTGATGCACTATTCGAGGCACCGGCGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
65.902 |
89.181 |
0.588 |