Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OH720_RS29890 Genome accession   NZ_CP110128
Coordinates   6633196..6633600 (-) Length   134 a.a.
NCBI ID   WP_008063477.1    Uniprot ID   -
Organism   Pseudomonas sp. WJP1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6628196..6638600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH720_RS29875 (OH720_29885) - 6630014..6632047 (-) 2034 WP_272606537.1 methyl-accepting chemotaxis protein -
  OH720_RS29880 (OH720_29890) - 6632229..6632762 (-) 534 WP_272603879.1 chemotaxis protein CheW -
  OH720_RS29885 (OH720_29895) pilH 6632773..6633138 (-) 366 WP_007897961.1 twitching motility response regulator PilH -
  OH720_RS29890 (OH720_29900) pilG 6633196..6633600 (-) 405 WP_008063477.1 twitching motility response regulator PilG Regulator
  OH720_RS29895 (OH720_29905) gshB 6633835..6634788 (+) 954 WP_008063478.1 glutathione synthase -
  OH720_RS29900 (OH720_29910) - 6634853..6635752 (+) 900 WP_272603880.1 energy transducer TonB -
  OH720_RS29905 (OH720_29915) - 6635933..6636505 (+) 573 WP_008063482.1 YqgE/AlgH family protein -
  OH720_RS29910 (OH720_29920) ruvX 6636505..6636942 (+) 438 WP_020797382.1 Holliday junction resolvase RuvX -
  OH720_RS29915 (OH720_29925) pyrR 6637029..6637532 (+) 504 WP_008063485.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OH720_RS29920 (OH720_29930) - 6637560..6638564 (+) 1005 WP_008063486.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14614.10 Da        Isoelectric Point: 7.8857

>NTDB_id=752547 OH720_RS29890 WP_008063477.1 6633196..6633600(-) (pilG) [Pseudomonas sp. WJP1]
MEKQPSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=752547 OH720_RS29890 WP_008063477.1 6633196..6633600(-) (pilG) [Pseudomonas sp. WJP1]
ATGGAAAAGCAACCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGCCGCACCGCCGAAACACTGCT
CAAGAATGTGGGTTGTGAGGTCATCACGGCCATCGACGGCTTCGATGCCCTGGCCAAGATCGCCGATCACCACCCCGGTA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCATTGATCAAGAACAACAGTGCATTCAAG
TCCACGCCAGTGATTATGCTGTCATCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
CCTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATACAGGCCCATGTTCCGGGCTTTGCCGCTGTTTTGCCGC
AGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709