Detailed information NTG0075250

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: SFSGTM_RS14820
• Genome accession: NZ_AP021881
• Coordinates: 3020450..3021424 (+)
• Length: 324 a.a.
• NCBI ID: WP_232526101.1
• Uniprot ID: -
• Organism: Sulfuriferula nivalis strain SGTM
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3015450..3026424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SFSGTM_RS14790 (SFSGTM_28640)	-	3015665..3016291 (+)	627	WP_162085828.1	carboxylesterase	-
SFSGTM_RS14795 (SFSGTM_28650)	-	3016288..3016533 (-)	246	WP_162085829.1	YfhL family 4Fe-4S dicluster ferredoxin	-
SFSGTM_RS14800 (SFSGTM_28660)	coaD	3016546..3017037 (-)	492	WP_162085830.1	pantetheine-phosphate adenylyltransferase	-
SFSGTM_RS14805 (SFSGTM_28670)	rsmD	3017030..3017590 (-)	561	WP_162085831.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SFSGTM_RS14810 (SFSGTM_28680)	-	3017587..3018900 (-)	1314	WP_162085832.1	pitrilysin family protein	-
SFSGTM_RS14815 (SFSGTM_28690)	-	3018909..3020267 (-)	1359	WP_162085833.1	pitrilysin family protein	-
SFSGTM_RS14820 (SFSGTM_28700)	pilA	3020450..3021424 (+)	975	WP_232526101.1	signal recognition particle-docking protein FtsY	Machinery gene
SFSGTM_RS14825 (SFSGTM_28710)	ftsE	3021421..3022068 (+)	648	WP_162085835.1	cell division ATP-binding protein FtsE	-
SFSGTM_RS14830 (SFSGTM_28720)	ftsX	3022065..3022967 (+)	903	WP_162085836.1	permease-like cell division protein FtsX	-
SFSGTM_RS14835 (SFSGTM_28730)	rpoH	3023038..3023889 (+)	852	WP_162085837.1	RNA polymerase sigma factor RpoH	-
SFSGTM_RS14840 (SFSGTM_28740)	ccoS	3024117..3024320 (-)	204	WP_162085838.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 34686.82 Da
• Isoelectric Point: 5.4498

>NTDB_id=75250 SFSGTM_RS14820 WP_232526101.1 3020450..3021424(+) (pilA) [Sulfuriferula nivalis strain SGTM]
MVETETELSVPPAVAPGKPSWAQRLKQGLSRTREQLGKQLTGLFSLGGKIDEDLFEELETILLTADVGIEATQTLLDQLR
SRVKKDKLTEAAQLQGALQDALITLLQPLESELDISTHNPFVIMMVGVNGAGKTTTIGKLAKFYQAQGKSVLLAAGDTFR
AAAREQLMVWGERNNVTVIAQDGGDSAAVIFDAIAAARARGIDIVLADTAGRLPTQAHLMEEIRKVKRVIQKTDPAAPHE
VLLVLDANTGQNAVTQVKTFDDVLGVTGLVLTKLDGTAKGGVIAAIAKSRPHPIRFIGVGESLDDLRPFVASEFVHALFE
SNPS

Nucleotide

• Length: 975 bp

>NTDB_id=75250 SFSGTM_RS14820 WP_232526101.1 3020450..3021424(+) (pilA) [Sulfuriferula nivalis strain SGTM]
ATTGTTGAAACCGAAACTGAACTGAGTGTACCGCCTGCAGTGGCGCCCGGCAAACCAAGCTGGGCACAACGACTCAAACA
AGGACTTTCACGTACCCGTGAACAGCTAGGCAAACAGCTAACTGGCCTGTTTAGTCTGGGTGGCAAAATTGACGAAGACT
TATTCGAGGAACTGGAAACTATACTCCTCACTGCCGATGTCGGTATTGAAGCGACGCAAACACTGCTTGATCAATTACGT
AGCAGAGTCAAAAAAGACAAGCTTACCGAAGCGGCACAATTACAAGGTGCGCTACAGGACGCATTAATTACATTACTGCA
ACCACTGGAGTCTGAACTCGACATCAGCACCCACAATCCCTTTGTCATTATGATGGTCGGCGTAAATGGTGCCGGCAAAA
CTACGACCATAGGTAAATTAGCAAAATTTTACCAGGCACAAGGTAAATCCGTCTTACTTGCAGCTGGCGACACTTTCCGT
GCAGCAGCTCGTGAACAGCTCATGGTATGGGGGGAACGCAACAATGTGACTGTCATCGCTCAGGATGGTGGTGACTCGGC
TGCGGTCATTTTTGATGCTATCGCCGCGGCACGTGCCCGCGGAATCGACATCGTGTTAGCCGATACAGCTGGCCGCCTGC
CTACCCAGGCACATTTAATGGAAGAAATACGCAAAGTAAAACGCGTCATCCAGAAAACCGACCCTGCTGCGCCGCACGAA
GTACTCCTCGTCCTGGACGCAAACACGGGACAAAATGCGGTTACCCAGGTCAAAACCTTTGACGATGTGCTGGGCGTAAC
TGGATTAGTACTGACCAAGCTCGACGGCACTGCCAAAGGCGGGGTAATCGCGGCCATTGCTAAATCTCGACCACACCCGA
TACGTTTTATCGGCGTTGGAGAAAGCTTGGATGATTTACGTCCCTTTGTAGCCAGTGAGTTTGTCCATGCTTTATTTGAA
AGCAATCCTTCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (120-319)

• SRP54-type protein, helical bundle domain (SRP54_N) (36-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	66.447	93.827	0.623