Detailed information NTG0752432

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: D3P44_RS19465
• Genome accession: NZ_CP110110
• Coordinates: 4098847..4100109 (-)
• Length: 420 a.a.
• NCBI ID: WP_212543498.1
• Uniprot ID: -
• Organism: Stutzerimonas balearica strain Z8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4093847..4105109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D3P44_RS19450 (D3P44_019450)	rpoH	4096190..4097044 (-)	855	WP_212543499.1	RNA polymerase sigma factor RpoH	-
D3P44_RS19455 (D3P44_019455)	ftsX	4097160..4098182 (-)	1023	WP_041108432.1	permease-like cell division protein FtsX	-
D3P44_RS19460 (D3P44_019460)	ftsE	4098179..4098850 (-)	672	WP_041108434.1	cell division ATP-binding protein FtsE	-
D3P44_RS19465 (D3P44_019465)	pilA	4098847..4100109 (-)	1263	WP_212543498.1	signal recognition particle-docking protein FtsY	Machinery gene
D3P44_RS19470 (D3P44_019470)	-	4100338..4101708 (+)	1371	WP_212543497.1	M16 family metallopeptidase	-
D3P44_RS19475 (D3P44_019475)	-	4101701..4103251 (+)	1551	WP_212543496.1	M16 family metallopeptidase	-
D3P44_RS19480 (D3P44_019480)	rsmD	4103251..4103847 (+)	597	WP_212543495.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
D3P44_RS19485 (D3P44_019485)	-	4103844..4104245 (-)	402	WP_212543494.1	ribonucleotide reductase subunit alpha	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 44977.02 Da
• Isoelectric Point: 4.8101

>NTDB_id=752432 D3P44_RS19465 WP_212543498.1 4098847..4100109(-) (pilA) [Stutzerimonas balearica strain Z8]
MFGSNDDKKTPAEAGEKKGLFGWLRKKPQTPAAEPPATEPPEESQPLADEPDREAEQTEREQLAEAHEAPVHEPAPEPVE
PPSVQLPEPEPAPSAEPTQPTAAAPEPAAPTRLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLEELETRLLTAD
VGVEATGAIMQNLTRRVSRKELADSGALYRALQEELAGLLRPVEQPLVVDGAKQPYVILVVGVNGVGKTTTIGKLAKKLQ
NEGKKVMLAAGDTFRAAAVEQLQVWGERNRIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELK
KVRRVIGKLDETAPHEVLLVLDAGTGQNAINQTRQFNQAVELSGIALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGID
DLRTFEADAFVKALFGQDER

Nucleotide

• Length: 1263 bp

>NTDB_id=752432 D3P44_RS19465 WP_212543498.1 4098847..4100109(-) (pilA) [Stutzerimonas balearica strain Z8]
ATGTTTGGTTCAAACGACGACAAGAAGACGCCGGCCGAGGCCGGCGAAAAGAAAGGGCTGTTCGGCTGGTTGCGCAAGAA
GCCGCAGACGCCTGCCGCCGAGCCGCCGGCGACCGAACCGCCGGAAGAGAGCCAGCCACTGGCCGATGAGCCCGACCGCG
AAGCCGAGCAAACGGAGCGCGAGCAACTGGCCGAGGCGCACGAAGCGCCGGTGCATGAGCCCGCCCCTGAGCCGGTCGAG
CCGCCCTCGGTGCAGCTCCCCGAGCCCGAGCCTGCACCGAGTGCCGAGCCCACGCAGCCGACCGCTGCTGCGCCGGAGCC
CGCTGCGCCGACCCGGCTGGGCTTCTTCGCCCGTTTGCGCCAGGGCCTGTCCAAGACCAGCGCCAGCATCGGCGAGGGCA
TGGCCAGTCTGTTCCTTGGCAAGAAGGCGATCGATGACGACCTGCTCGAAGAGCTGGAAACACGCCTGCTGACCGCCGAC
GTCGGCGTCGAGGCGACTGGCGCGATCATGCAGAACCTGACCCGCCGGGTCTCGCGCAAGGAGCTGGCCGACAGCGGCGC
GCTGTATCGCGCGCTGCAGGAAGAGCTGGCCGGGCTGCTGCGCCCGGTCGAGCAGCCGCTGGTCGTCGATGGCGCCAAGC
AGCCCTACGTGATCCTCGTGGTCGGGGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTTGCCAAGAAGCTGCAG
AACGAAGGCAAGAAGGTCATGCTCGCCGCCGGCGATACCTTCCGCGCCGCGGCAGTCGAGCAGCTGCAGGTCTGGGGCGA
GCGCAACCGTATTCCGGTGATTGCCCAGCATACCGGCGCCGATTCCGCCTCGGTCATCTTCGATGCGGTGCAGGCGGCCA
AGGCGCGCGGCATCGACGTGCTGATCGCCGATACCGCCGGTCGTCTGCATACCAAGGACAACCTCATGGAGGAGCTGAAG
AAGGTGCGCCGGGTGATCGGCAAGCTGGACGAGACCGCGCCCCATGAAGTGCTGCTGGTGCTCGATGCCGGCACCGGGCA
AAACGCGATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTCAGTGGCATCGCCCTGACCAAGCTCGACGGCACGG
CCAAGGGCGGCGTGATCTTCGCGCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTCGGTGAAGGGATCGAC
GACCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCTCTGTTCGGTCAGGACGAGCGATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (131-196)

• SRP54-type protein, GTPase domain (SRP54) (216-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.486