Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   OKV75_RS23605 Genome accession   NZ_CP110109
Coordinates   4637602..4637778 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis strain TG-5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4632602..4642778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKV75_RS23585 clpC 4632933..4635533 (+) 2601 WP_072939718.1 ATP-dependent chaperone ClpB Regulator
  OKV75_RS23590 - 4635572..4635754 (-) 183 WP_001211116.1 YjzD family protein -
  OKV75_RS23595 - 4635911..4636645 (+) 735 WP_000028690.1 hydrolase -
  OKV75_RS23600 - 4636675..4637547 (+) 873 WP_264647804.1 NAD(P)-dependent oxidoreductase -
  OKV75_RS23605 comZ 4637602..4637778 (+) 177 WP_001986215.1 ComZ family protein Regulator
  OKV75_RS23610 fabH 4638010..4638942 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  OKV75_RS23615 fabF 4638974..4640212 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  OKV75_RS23620 - 4640319..4641107 (+) 789 WP_000513280.1 DUF2268 domain-containing protein -
  OKV75_RS23625 - 4641252..4641998 (+) 747 WP_000966129.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=752395 OKV75_RS23605 WP_001986215.1 4637602..4637778(+) (comZ) [Bacillus thuringiensis strain TG-5]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=752395 OKV75_RS23605 WP_001986215.1 4637602..4637778(+) (comZ) [Bacillus thuringiensis strain TG-5]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCGAAGGCAATTTTAGATGATAACGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586