Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   OKV75_RS10275 Genome accession   NZ_CP110109
Coordinates   2066898..2067356 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain TG-5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2061898..2072356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKV75_RS10260 - 2062568..2062804 (+) 237 WP_000283738.1 hypothetical protein -
  OKV75_RS10265 - 2062965..2065073 (-) 2109 WP_264648088.1 polyphosphate kinase -
  OKV75_RS10270 - 2065182..2066756 (-) 1575 WP_071713521.1 Ppx/GppA family phosphatase -
  OKV75_RS10275 kre 2066898..2067356 (+) 459 WP_000804864.1 YkyB family protein Regulator
  OKV75_RS10280 - 2067388..2068050 (-) 663 WP_264648089.1 YkyA family protein -
  OKV75_RS10285 - 2068664..2069317 (-) 654 WP_000680816.1 diguanylate cyclase domain-containing protein -
  OKV75_RS10290 - 2069481..2069714 (+) 234 WP_000939446.1 SPP1 phage holin family protein -
  OKV75_RS10295 - 2069746..2070246 (-) 501 WP_098919804.1 hypothetical protein -
  OKV75_RS10300 - 2070658..2072199 (+) 1542 WP_072940560.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=752363 OKV75_RS10275 WP_000804864.1 2066898..2067356(+) (kre) [Bacillus thuringiensis strain TG-5]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=752363 OKV75_RS10275 WP_000804864.1 2066898..2067356(+) (kre) [Bacillus thuringiensis strain TG-5]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493