Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   OKW88_RS20935 Genome accession   NZ_CP110105
Coordinates   4071475..4072131 (+) Length   218 a.a.
NCBI ID   WP_003232942.1    Uniprot ID   A0AAQ3ENL6
Organism   Bacillus subtilis strain CF03     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4066475..4077131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKW88_RS20905 (OKW88_20870) oppF 4066942..4067859 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  OKW88_RS20910 (OKW88_20875) yjbB 4067965..4069182 (+) 1218 WP_095843630.1 MFS transporter -
  OKW88_RS20915 (OKW88_20880) yjbC 4069345..4069923 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  OKW88_RS20920 (OKW88_20885) spx 4070104..4070499 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  OKW88_RS20925 (OKW88_20890) yjbE 4070542..4071198 (-) 657 WP_003232944.1 TerC family protein -
  OKW88_RS20930 (OKW88_20895) - 4071368..4071508 (+) 141 WP_119122854.1 hypothetical protein -
  OKW88_RS20935 (OKW88_20900) mecA 4071475..4072131 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  OKW88_RS20940 (OKW88_20905) - 4072126..4072247 (-) 122 Protein_4067 hypothetical protein -
  OKW88_RS20945 (OKW88_20910) coiA 4072291..4073442 (+) 1152 WP_167408053.1 competence protein CoiA Machinery gene
  OKW88_RS20950 (OKW88_20915) pepF 4073672..4075501 (+) 1830 WP_167408054.1 oligoendopeptidase F -
  OKW88_RS20955 (OKW88_20920) - 4075539..4075706 (-) 168 WP_003244944.1 hypothetical protein -
  OKW88_RS20960 (OKW88_20925) spxH 4076020..4076919 (-) 900 WP_024573348.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25762.62 Da        Isoelectric Point: 4.0841

>NTDB_id=752321 OKW88_RS20935 WP_003232942.1 4071475..4072131(+) (mecA) [Bacillus subtilis strain CF03]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=752321 OKW88_RS20935 WP_003232942.1 4071475..4072131(+) (mecA) [Bacillus subtilis strain CF03]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.083

100

0.991