Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QFX62_RS13520 Genome accession   NZ_CP123744
Coordinates   2718824..2719624 (-) Length   266 a.a.
NCBI ID   WP_000088648.1    Uniprot ID   A0A0H2XG71
Organism   Staphylococcus aureus strain 1.8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2713824..2724624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFX62_RS13500 - 2715036..2715128 (-) 93 WP_001790000.1 hypothetical protein -
  QFX62_RS13505 - 2715092..2715226 (+) 135 WP_001790628.1 hypothetical protein -
  QFX62_RS13510 rlmH 2715431..2715910 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QFX62_RS13515 adsA 2716278..2718596 (-) 2319 WP_049309091.1 LPXTG-anchored adenosine synthase AdsA -
  QFX62_RS13520 vicX 2718824..2719624 (-) 801 WP_000088648.1 MBL fold metallo-hydrolase Regulator
  QFX62_RS13525 - 2720014..2720802 (-) 789 WP_001104172.1 two-component system regulatory protein YycI -
  QFX62_RS13530 yycH 2720803..2722137 (-) 1335 WP_304984609.1 two-component system activity regulator YycH -
  QFX62_RS13535 walK 2722130..2723956 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.55 Da        Isoelectric Point: 6.3392

>NTDB_id=752114 QFX62_RS13520 WP_000088648.1 2718824..2719624(-) (vicX) [Staphylococcus aureus strain 1.8]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=752114 QFX62_RS13520 WP_000088648.1 2718824..2719624(-) (vicX) [Staphylococcus aureus strain 1.8]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477