Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   OLL92_RS03850 Genome accession   NZ_CP110059
Coordinates   778244..779917 (+) Length   557 a.a.
NCBI ID   WP_016622703.1    Uniprot ID   -
Organism   Enterococcus faecalis strain BE16     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 773244..784917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OLL92_RS03820 (OLL92_03820) - 773917..774147 (+) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  OLL92_RS03825 (OLL92_03825) - 774147..775028 (+) 882 WP_002355879.1 polyprenyl synthetase family protein -
  OLL92_RS03830 (OLL92_03830) - 775042..775857 (+) 816 WP_002361403.1 TlyA family RNA methyltransferase -
  OLL92_RS03835 (OLL92_03835) - 776223..776780 (+) 558 WP_002361405.1 matrixin family metalloprotease -
  OLL92_RS03840 (OLL92_03840) - 776785..777645 (+) 861 WP_010706683.1 hypothetical protein -
  OLL92_RS03845 (OLL92_03845) - 777777..778226 (+) 450 WP_002358881.1 arginine repressor -
  OLL92_RS03850 (OLL92_03850) recN 778244..779917 (+) 1674 WP_016622703.1 DNA repair protein RecN Machinery gene
  OLL92_RS03855 (OLL92_03855) - 780008..780118 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  OLL92_RS03860 (OLL92_03860) - 780186..781151 (-) 966 WP_002383400.1 magnesium transporter CorA family protein -
  OLL92_RS03865 (OLL92_03865) - 781396..781788 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  OLL92_RS03870 (OLL92_03870) mraZ 782022..782507 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  OLL92_RS03875 (OLL92_03875) rsmH 782522..783478 (+) 957 WP_002355891.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  OLL92_RS03880 (OLL92_03880) ftsL 783495..783902 (+) 408 WP_002358883.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62626.07 Da        Isoelectric Point: 4.5967

>NTDB_id=751885 OLL92_RS03850 WP_016622703.1 778244..779917(+) (recN) [Enterococcus faecalis strain BE16]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDPEYKSLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAKKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=751885 OLL92_RS03850 WP_016622703.1 778244..779917(+) (recN) [Enterococcus faecalis strain BE16]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGTGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGGATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGC
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATCCAGAATATAAATC
ATTGTCAGATACTGTTCAAAATGCTTACTACTTACTACAAGAAGCTAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGATGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATTACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGCGA
CTTAGAAGCGTTGCTTGCAAAGAAACAACAAGCCGCTCATCAACAAGCATTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTTGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACTGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGTTGGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTCAGTGGCCGTGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCACGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.421

100

0.496