Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QFX50_RS06990 Genome accession   NZ_CP123740
Coordinates   1417808..1418482 (+) Length   224 a.a.
NCBI ID   WP_001166508.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 2.3b     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1412808..1423482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFX50_RS06965 - 1412987..1414054 (+) 1068 WP_137311611.1 hypothetical protein -
  QFX50_RS06970 - 1414205..1415248 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  QFX50_RS06975 - 1415613..1416041 (+) 429 WP_000198504.1 hypothetical protein -
  QFX50_RS06980 - 1416250..1416756 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QFX50_RS06985 graX 1416869..1417792 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  QFX50_RS06990 braR 1417808..1418482 (+) 675 WP_001166508.1 response regulator transcription factor GraR/ApsR Regulator
  QFX50_RS06995 graS 1418475..1419515 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  QFX50_RS07000 vraF 1419659..1420420 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  QFX50_RS07005 vraG 1420410..1422299 (+) 1890 WP_000143627.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 25993.81 Da        Isoelectric Point: 4.3915

>NTDB_id=751704 QFX50_RS06990 WP_001166508.1 1417808..1418482(+) (braR) [Staphylococcus aureus strain 2.3b]
MQILLVEDDNTLFQELKKELGQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=751704 QFX50_RS06990 WP_001166508.1 1417808..1418482(+) (braR) [Staphylococcus aureus strain 2.3b]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGGACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397