Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   OLM03_RS03815 Genome accession   NZ_CP110039
Coordinates   778485..780158 (+) Length   557 a.a.
NCBI ID   WP_002393460.1    Uniprot ID   -
Organism   Enterococcus faecalis strain BE47     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 773485..785158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OLM03_RS03785 (OLM03_03785) - 773736..774581 (+) 846 WP_264547520.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  OLM03_RS03790 (OLM03_03790) xseA 774591..775937 (+) 1347 WP_016630170.1 exodeoxyribonuclease VII large subunit -
  OLM03_RS03795 (OLM03_03795) - 775939..776169 (+) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -
  OLM03_RS03800 (OLM03_03800) - 776169..777050 (+) 882 WP_002373613.1 polyprenyl synthetase family protein -
  OLM03_RS03805 (OLM03_03805) - 777064..777879 (+) 816 WP_002355880.1 TlyA family RNA methyltransferase -
  OLM03_RS03810 (OLM03_03810) - 778018..778467 (+) 450 WP_002358881.1 arginine repressor -
  OLM03_RS03815 (OLM03_03815) recN 778485..780158 (+) 1674 WP_002393460.1 DNA repair protein RecN Machinery gene
  OLM03_RS03820 (OLM03_03820) - 780249..780359 (-) 111 WP_002383399.1 DUF4044 domain-containing protein -
  OLM03_RS03825 (OLM03_03825) - 780427..781392 (-) 966 WP_016630171.1 magnesium transporter CorA family protein -
  OLM03_RS03830 (OLM03_03830) - 781637..782029 (+) 393 WP_002383401.1 DUF3397 domain-containing protein -
  OLM03_RS03835 (OLM03_03835) mraZ 782263..782748 (+) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  OLM03_RS03840 (OLM03_03840) rsmH 782763..783719 (+) 957 WP_010774092.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  OLM03_RS03845 (OLM03_03845) ftsL 783736..784143 (+) 408 WP_016627307.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62600.97 Da        Isoelectric Point: 4.5521

>NTDB_id=751628 OLM03_RS03815 WP_002393460.1 778485..780158(+) (recN) [Enterococcus faecalis strain BE47]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDSEYKTLSDAVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=751628 OLM03_RS03815 WP_002393460.1 778485..780158(+) (recN) [Enterococcus faecalis strain BE47]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGTGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATCCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGGATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTAGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAATTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTCGCTGGCGAAGAAGAACAATTGT
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATTCAGAATATAAAAC
ATTGTCAGATGCTGTTCAAAATGCTTACTACTTACTACAAGAAGCCAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGACGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGTGATTCG
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCAGCTCATCAACAAGCGTTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTCGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACTGAATTTGAAGTCCGCTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTGGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTAGATACAGGAGTCAGTGGCCGTGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCAGCCGTTGCTGATGAACATTATTTTATTGA
AAAAGAAATTGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.168

100

0.496