Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   OCX17_RS01735 Genome accession   NZ_AP024732
Coordinates   386889..387734 (+) Length   281 a.a.
NCBI ID   WP_001566903.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 59621     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 381889..392734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCX17_RS01720 - 382155..383996 (-) 1842 WP_000077320.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  OCX17_RS01725 metC 383965..385125 (-) 1161 WP_000175854.1 cystathionine beta-lyase MetC -
  OCX17_RS01730 - 385122..386225 (-) 1104 WP_261933993.1 PLP-dependent transferase -
  OCX17_RS01735 spo0J 386889..387734 (+) 846 WP_001566903.1 ParB/RepB/Spo0J family partition protein Regulator
  OCX17_RS01740 - 387891..388772 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  OCX17_RS01745 - 388802..389005 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  OCX17_RS01750 ychF 389017..390114 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  OCX17_RS01755 - 390200..390391 (-) 192 WP_001052483.1 hypothetical protein -
  OCX17_RS01760 rpsF 390635..390931 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  OCX17_RS01765 ssbA 390952..391455 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  OCX17_RS01770 rpsR 391507..391749 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32869.88 Da        Isoelectric Point: 10.0091

>NTDB_id=75156 OCX17_RS01735 WP_001566903.1 386889..387734(+) (spo0J) [Staphylococcus aureus strain 59621]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFLRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=75156 OCX17_RS01735 WP_001566903.1 386889..387734(+) (spo0J) [Staphylococcus aureus strain 59621]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTCTAAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384