Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QFX56_RS03175 Genome accession   NZ_CP123738
Coordinates   669814..670488 (+) Length   224 a.a.
NCBI ID   WP_001166508.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 2.6     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 664814..675488
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QFX56_RS03150 - 664993..666060 (+) 1068 WP_137311611.1 hypothetical protein -
  QFX56_RS03155 - 666211..667254 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  QFX56_RS03160 - 667619..668047 (+) 429 WP_000198504.1 hypothetical protein -
  QFX56_RS03165 - 668256..668762 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QFX56_RS03170 graX 668875..669798 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  QFX56_RS03175 braR 669814..670488 (+) 675 WP_001166508.1 response regulator transcription factor GraR/ApsR Regulator
  QFX56_RS03180 graS 670481..671521 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  QFX56_RS03185 vraF 671665..672426 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  QFX56_RS03190 vraG 672416..674305 (+) 1890 WP_000143627.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 25993.81 Da        Isoelectric Point: 4.3915

>NTDB_id=751516 QFX56_RS03175 WP_001166508.1 669814..670488(+) (braR) [Staphylococcus aureus strain 2.6]
MQILLVEDDNTLFQELKKELGQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=751516 QFX56_RS03175 WP_001166508.1 669814..670488(+) (braR) [Staphylococcus aureus strain 2.6]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGGACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397