Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OU418_RS18490 Genome accession   NZ_CP123621
Coordinates   3534875..3535588 (-) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain RLI2019     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3529875..3540588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OU418_RS18470 (OU418_18480) ghrB 3530020..3530997 (+) 978 WP_072173470.1 D-glycerate dehydrogenase -
  OU418_RS18475 (OU418_18485) psdB 3531034..3532974 (-) 1941 WP_041850493.1 lantibiotic ABC transporter permease PsdB -
  OU418_RS18480 (OU418_18490) psdA 3532949..3533728 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  OU418_RS18485 (OU418_18495) psdS 3533811..3534881 (-) 1071 WP_041850492.1 two-component sensor histidine kinase PsdS -
  OU418_RS18490 (OU418_18500) braR 3534875..3535588 (-) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  OU418_RS18495 (OU418_18505) - 3535935..3536705 (-) 771 WP_043940202.1 hypothetical protein -
  OU418_RS18500 (OU418_18510) - 3536842..3537042 (+) 201 WP_373569463.1 hypothetical protein -
  OU418_RS18505 (OU418_18515) yvcN 3537106..3537870 (-) 765 WP_080332556.1 arylamine N-acetyltransferase -
  OU418_RS18510 (OU418_18520) crh 3537871..3538128 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  OU418_RS18515 (OU418_18525) whiA 3538152..3539102 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  OU418_RS18520 (OU418_18530) mgfK 3539125..3540078 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=751483 OU418_RS18490 WP_003228163.1 3534875..3535588(-) (braR) [Bacillus subtilis strain RLI2019]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=751483 OU418_RS18490 WP_003228163.1 3534875..3535588(-) (braR) [Bacillus subtilis strain RLI2019]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43