Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   OI501_RS17625 Genome accession   NZ_CP109973
Coordinates   3505778..3506374 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain 857     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3500778..3511374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OI501_RS17610 (OI501_17615) helD 3500986..3503040 (-) 2055 WP_002898429.1 DNA helicase IV -
  OI501_RS17615 (OI501_17620) - 3503165..3503611 (+) 447 WP_002898425.1 YccF domain-containing protein -
  OI501_RS17620 (OI501_17625) yccS 3503629..3505764 (+) 2136 WP_002898422.1 YccS family putative transporter -
  OI501_RS17625 (OI501_17630) sxy/tfoX 3505778..3506374 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  OI501_RS17630 (OI501_17635) sulA 3506723..3507232 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  OI501_RS17635 (OI501_17640) ompA 3507585..3508655 (+) 1071 WP_062954987.1 porin OmpA -
  OI501_RS17640 (OI501_17645) matP 3508787..3509239 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  OI501_RS17645 (OI501_17650) - 3509425..3511182 (+) 1758 WP_002898401.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=751376 OI501_RS17625 WP_004150836.1 3505778..3506374(-) (sxy/tfoX) [Klebsiella pneumoniae strain 857]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=751376 OI501_RS17625 WP_004150836.1 3505778..3506374(-) (sxy/tfoX) [Klebsiella pneumoniae strain 857]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51