Detailed information NTG0075109

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: Vgang_RS10120
• Genome accession: NZ_AP021869
• Coordinates: 2186715..2190098 (+)
• Length: 1127 a.a.
• NCBI ID: WP_105900757.1
• Uniprot ID: -
• Organism: Vibrio gangliei strain DSM 104291
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2181715..2195098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Vgang_RS10100	erpA	2181893..2182234 (-)	342	WP_105900761.1	iron-sulfur cluster insertion protein ErpA	-
Vgang_RS10105	hemL	2182559..2183848 (+)	1290	WP_105900760.1	glutamate-1-semialdehyde 2,1-aminomutase	-
Vgang_RS10110	-	2184205..2185290 (+)	1086	WP_105900759.1	AI-2E family transporter	-
Vgang_RS10115	rsmC	2185376..2186401 (+)	1026	WP_105900758.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
Vgang_RS10120	chiS	2186715..2190098 (+)	3384	WP_105900757.1	response regulator	Regulator
Vgang_RS10125	-	2191116..2192798 (+)	1683	WP_105900756.1	ABC transporter substrate-binding protein	-
Vgang_RS10130	-	2192975..2193961 (+)	987	WP_105900755.1	ABC transporter permease	-
Vgang_RS10135	-	2193964..2194989 (+)	1026	WP_105900754.1	ABC transporter permease	-

Sequence

Protein

• Length: 1127 a.a.
• Molecular weight: 127196.00 Da
• Isoelectric Point: 6.2812

>NTDB_id=75109 Vgang_RS10120 WP_105900757.1 2186715..2190098(+) (chiS) [Vibrio gangliei strain DSM 104291]
MLKSRKTHKFQRLQHTLMVAFLVLSLTPLTIIGLFFLHSHSQDLQEQSTSYLVSVRDTKKQQINDYIKSKQSEVLGIVRS
ELAYASGGRFYGLISAFTKLGDSPEESRANAQQRYILGSGDQIKTSVLPESKNYASTERYRLLHKRYHWAYLDILKRSDF
SDILLIDLDGDVAYSVMKNDDFGTNLLTGKHKDSMLGQTFKRLTEVVKASRQNNEDYTPILVSDFSQEHGQQVMWIGAPI
IQQGYLHSYAMFKLPSTALTNTITETNKDTTQLLVGSDNLARIQGLKTEQITASEEVITKALAGHTAVGSFSNTHDEKII
AAYTPVKVQDKTWALVVELPEKEAYARVQQLEHIFYLVMLIGVAVVIICSHYLSNFITLPLLKLTWVAERVSAGDLTQDI
INIERKDEIGRLATSFARMQRSIKDKIDLIGSQNAKLEENIKTIRQQNDELQLANKLKDEFLATTSHELRTPLHGMVGIA
EALNSGANGPVPAHQKHQLSIIINSGQRLATLVDDLLDYHKMRYGNLDIQKTAVDLSSTTHLVLELSKHLLGNKPIRIIN
QIPVELPLVLADAQRLEQVLYNLVGNAIKYTSEGKIIISATILEHSIRVQVVDTGQGIPSDQLEHIFEPLIQAGQDSSRY
RQGAGLGLSISRQLIELMGGTLYVSSQPLVGTTFSFTLPIATDEQIEAYQQSQINHHFQAPEVHNFVNNDDSSLPQNPNG
PLLVVADDEPVNLQILDSFLRLEGYRVKTATDGLTALKLIEDEKPELVLLDIMMPGMSGYEVCQDVRQTYDHAQLPIILL
TALSQTNDRIRGFEAGANDYLTKPFNKQELAARIRAHLTASKAELRRIENAQLQQELRLREQVEASLLETQGRLLEQLES
APEAIICLREDGRIRFANDSAAKLFRRTPEQLRRSQADEIIAPKFLKITQEHFCGEIDVFIEDKREHLICDILTLPEGSG
LKYMYIFNMGGGVNAQRIDNLETAIEALSSYAFEGDKNKLQQLKELGGEFTRLADKVAHKSEDKQQIMREILVETMNTAL
DYWESDTGQTKFTLAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNTIDYILENTSAENTQRQHLIACRER
IQTLLTN

Nucleotide

• Length: 3384 bp

>NTDB_id=75109 Vgang_RS10120 WP_105900757.1 2186715..2190098(+) (chiS) [Vibrio gangliei strain DSM 104291]
ATGTTAAAGTCACGTAAGACTCATAAATTTCAAAGACTTCAGCACACTTTAATGGTGGCATTTCTCGTTTTAAGTCTCAC
ACCTTTAACCATTATTGGTTTATTTTTCTTGCATTCGCACAGCCAAGACTTACAAGAACAAAGTACCTCTTATTTGGTCT
CAGTTCGCGACACGAAAAAACAACAAATAAATGACTACATCAAGTCCAAGCAATCCGAAGTATTAGGCATTGTTCGTTCA
GAATTAGCTTATGCCAGTGGTGGGCGTTTTTATGGTTTGATCAGCGCATTTACCAAGTTAGGGGATTCACCAGAAGAATC
TCGAGCCAATGCACAGCAGCGCTATATTTTGGGCTCAGGCGATCAAATTAAAACCTCGGTGCTACCAGAGTCGAAAAATT
ACGCGAGCACCGAACGCTATCGATTACTGCATAAACGCTATCACTGGGCTTATCTTGATATTCTAAAACGTTCAGATTTT
AGTGATATTTTACTGATTGATTTAGATGGCGATGTTGCTTATTCGGTGATGAAAAATGACGATTTTGGTACCAACTTACT
CACCGGCAAGCATAAAGATTCTATGCTGGGGCAAACTTTCAAGCGTTTAACGGAAGTGGTGAAAGCGTCACGCCAAAACA
ATGAAGATTACACCCCCATTCTTGTCTCCGACTTCAGTCAAGAGCATGGACAGCAAGTCATGTGGATTGGTGCGCCCATC
ATTCAACAGGGCTACTTACACAGCTACGCGATGTTTAAGCTACCCAGTACCGCACTCACCAATACCATCACAGAAACCAA
TAAAGACACCACTCAATTGCTAGTGGGTTCAGACAATCTAGCCAGGATACAAGGGCTCAAAACAGAACAAATCACGGCCA
GTGAAGAAGTCATCACCAAAGCTCTCGCCGGTCACACTGCTGTAGGTTCGTTTTCCAATACCCATGATGAAAAAATTATC
GCGGCTTACACACCGGTTAAAGTACAAGATAAGACGTGGGCCTTAGTGGTTGAATTACCAGAAAAAGAAGCTTACGCACG
TGTTCAGCAATTAGAGCATATTTTCTATCTAGTGATGCTGATAGGAGTGGCTGTCGTGATCATCTGCTCTCACTATCTAT
CAAACTTTATTACCCTGCCGCTGCTGAAACTAACTTGGGTCGCGGAACGAGTATCTGCTGGTGACCTGACTCAAGATATC
ATCAATATAGAACGAAAGGATGAAATTGGGCGTCTTGCCACCAGCTTTGCACGCATGCAACGATCCATCAAAGATAAGAT
TGATTTAATTGGATCTCAAAACGCAAAATTAGAAGAAAATATTAAAACCATTCGCCAGCAAAATGATGAATTACAGCTAG
CAAACAAATTGAAAGATGAATTTTTAGCCACCACATCACATGAGCTAAGAACCCCACTACACGGAATGGTGGGTATTGCC
GAAGCGTTAAACTCAGGTGCAAATGGCCCAGTTCCTGCACACCAAAAACACCAACTCTCTATTATCATCAATAGCGGTCA
ACGCTTGGCAACCTTAGTCGATGATTTACTTGATTACCATAAGATGCGTTACGGTAACTTGGACATTCAAAAAACCGCGG
TCGATTTATCCTCGACGACTCACCTAGTGCTAGAGCTGTCAAAGCATTTGCTCGGTAATAAACCCATCCGCATCATTAAT
CAGATCCCGGTCGAACTGCCATTGGTTCTAGCCGATGCACAACGCTTAGAACAAGTGCTTTATAACCTGGTTGGTAATGC
CATCAAGTATACCTCGGAAGGTAAAATCATCATTTCCGCAACGATTTTAGAGCACAGCATTCGTGTTCAAGTCGTGGATA
CGGGGCAAGGCATTCCATCCGATCAACTCGAACACATTTTCGAACCTCTCATCCAAGCTGGACAAGACTCTAGCCGTTAT
CGCCAAGGTGCTGGTCTTGGTTTATCGATCAGCCGTCAACTCATAGAGTTAATGGGTGGCACGCTCTATGTTAGCAGCCA
ACCTCTGGTCGGAACCACCTTCAGTTTCACTTTGCCGATCGCGACCGACGAGCAAATTGAAGCCTATCAGCAAAGCCAGA
TTAATCATCACTTCCAAGCCCCAGAAGTGCATAACTTCGTCAATAATGATGATTCTTCATTGCCACAAAACCCCAATGGC
CCCCTATTGGTGGTGGCAGATGATGAGCCAGTTAACCTACAGATTCTTGACAGTTTCCTACGTTTAGAAGGCTACCGAGT
TAAAACCGCAACCGATGGACTGACAGCGTTAAAACTCATTGAAGATGAAAAGCCTGAATTGGTTCTGCTGGATATTATGA
TGCCAGGCATGAGTGGCTATGAAGTCTGTCAGGATGTACGTCAAACATACGATCATGCCCAATTACCGATCATTTTATTA
ACGGCGTTAAGCCAAACCAATGATCGAATCCGTGGCTTTGAAGCCGGTGCAAACGACTACCTCACTAAACCTTTTAATAA
GCAAGAGCTTGCCGCTCGTATTCGAGCACATCTCACGGCCAGCAAAGCCGAATTGAGACGAATTGAAAACGCACAACTGC
AACAAGAGCTACGTCTGCGTGAGCAAGTTGAAGCGAGTCTACTAGAAACCCAAGGGCGTCTATTAGAACAACTCGAATCC
GCTCCTGAAGCCATTATCTGCTTGCGTGAAGATGGTCGTATTCGCTTTGCCAATGATTCTGCCGCCAAATTATTTAGACG
CACACCAGAGCAACTTAGGCGCTCACAAGCCGATGAAATCATTGCACCTAAGTTCTTAAAAATTACTCAAGAACATTTCT
GCGGCGAAATTGATGTATTTATTGAGGATAAACGTGAGCATCTCATTTGCGACATTCTCACACTGCCAGAAGGCTCAGGG
CTGAAATACATGTATATCTTTAATATGGGTGGCGGCGTCAACGCACAACGAATTGATAATCTCGAAACAGCCATAGAAGC
GCTATCCAGTTATGCCTTTGAAGGGGATAAGAACAAACTTCAGCAACTCAAAGAGCTAGGGGGAGAATTTACCCGTTTAG
CCGACAAAGTGGCGCATAAGAGTGAAGATAAACAACAAATCATGCGTGAAATATTGGTTGAAACGATGAATACCGCGCTA
GATTACTGGGAATCAGATACCGGGCAGACGAAATTTACTCTAGCTGAACAAAGTGGTCTATGGCGTGTATACCTTGACCG
AAGCACTCTACAAACTCGCACCTTAGATAAATATTTGCGAATAGAAACGCTACCGAAAACCCCACGTTGGCGCACAGTAC
TCAATACTATTGATTACATCTTGGAAAATACCTCGGCAGAGAATACGCAACGTCAGCACTTAATTGCATGTCGAGAAAGG
ATACAAACCTTGCTTACTAACTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (458-523)

• HAMP domain (HAMP) (373-424)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (572-680)

• Response regulator receiver domain (Response_reg) (724-835)

• PAS fold (PAS) (875-915)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	69.973	100	0.701