Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   OCX16_RS02280 Genome accession   NZ_AP024730
Coordinates   494006..494809 (+) Length   267 a.a.
NCBI ID   WP_001134193.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 59574     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 489006..499809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCX16_RS02260 - 490552..491889 (+) 1338 WP_000812834.1 aminotransferase class V-fold PLP-dependent enzyme -
  OCX16_RS02265 tmk 491891..492508 (+) 618 WP_001272131.1 dTMP kinase -
  OCX16_RS02270 - 492536..492865 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  OCX16_RS02275 - 493079..494005 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  OCX16_RS02280 yaaT 494006..494809 (+) 804 WP_001134193.1 stage 0 sporulation family protein Regulator
  OCX16_RS02285 yabA 494826..495173 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  OCX16_RS02290 - 495447..496172 (+) 726 WP_000910684.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  OCX16_RS02295 - 496165..496413 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  OCX16_RS02300 rsmI 496415..497254 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  OCX16_RS02305 metG 497539..499512 (+) 1974 WP_001051130.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30204.83 Da        Isoelectric Point: 4.5759

>NTDB_id=75073 OCX16_RS02280 WP_001134193.1 494006..494809(+) (yaaT) [Staphylococcus aureus strain 59574]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=75073 OCX16_RS02280 WP_001134193.1 494006..494809(+) (yaaT) [Staphylococcus aureus strain 59574]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGAGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622

Multiple sequence alignment