Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OK021_RS00300 Genome accession   NZ_CP109906
Coordinates   60117..60515 (-) Length   132 a.a.
NCBI ID   WP_016447937.1    Uniprot ID   A0AAX3SQK3
Organism   Delftia sp. UGAL515B_04     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 55117..65515
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OK021_RS00285 (OK021_00285) - 56938..59190 (-) 2253 WP_016447934.1 methyl-accepting chemotaxis protein -
  OK021_RS00290 (OK021_00290) - 59209..59736 (-) 528 WP_016447935.1 chemotaxis protein CheW -
  OK021_RS00295 (OK021_00295) - 59752..60117 (-) 366 WP_016447936.1 PleD family two-component system response regulator -
  OK021_RS00300 (OK021_00300) pilG 60117..60515 (-) 399 WP_016447937.1 PleD family two-component system response regulator Regulator
  OK021_RS00305 (OK021_00305) - 60563..60715 (-) 153 WP_017406135.1 rubredoxin -
  OK021_RS00310 (OK021_00310) - 60831..61790 (+) 960 WP_016453190.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  OK021_RS00315 (OK021_00315) hemL 61865..63181 (+) 1317 WP_370690594.1 glutamate-1-semialdehyde 2,1-aminomutase -
  OK021_RS00320 (OK021_00320) - 63232..63831 (-) 600 WP_074922779.1 DNA-3-methyladenine glycosylase I -
  OK021_RS00325 (OK021_00325) - 63834..64310 (-) 477 WP_017406137.1 c-type cytochrome -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14600.85 Da        Isoelectric Point: 6.9242

>NTDB_id=750509 OK021_RS00300 WP_016447937.1 60117..60515(-) (pilG) [Delftia sp. UGAL515B_04]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=750509 OK021_RS00300 WP_016447937.1 60117..60515(-) (pilG) [Delftia sp. UGAL515B_04]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAGCAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAGGTCAACGACTACCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTTGCT
GACACGCCTGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCTGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508