Detailed information NTG0750490

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OK026_RS10925
• Genome accession: NZ_CP109905
• Coordinates: 2414971..2416116 (+)
• Length: 381 a.a.
• NCBI ID: WP_081555061.1
• Uniprot ID: -
• Organism: Chromobacterium haemolyticum strain UGAL515B_03
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2409971..2421116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OK026_RS10875 (OK026_10880)	rplK	2410567..2410998 (-)	432	WP_019100246.1	50S ribosomal protein L11	-
OK026_RS10880 (OK026_10885)	nusG	2411098..2411631 (-)	534	WP_043594671.1	transcription termination/antitermination protein NusG	-
OK026_RS10885 (OK026_10890)	secE	2411631..2411987 (-)	357	WP_081574308.1	preprotein translocase subunit SecE	-
OK026_RS10895 (OK026_10900)	tuf	2412144..2413334 (-)	1191	WP_081555062.1	elongation factor Tu	-
OK026_RS10915 (OK026_10920)	-	2413821..2414072 (-)	252	WP_019100314.1	YfhL family 4Fe-4S dicluster ferredoxin	-
OK026_RS10920 (OK026_10925)	rsmD	2414176..2414733 (-)	558	WP_043592276.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OK026_RS10925 (OK026_10930)	pilA	2414971..2416116 (+)	1146	WP_081555061.1	signal recognition particle-docking protein FtsY	Machinery gene
OK026_RS10930 (OK026_10935)	ftsE	2416177..2416830 (+)	654	WP_043592279.1	cell division ATP-binding protein FtsE	-
OK026_RS10935 (OK026_10940)	ftsX	2416827..2417735 (+)	909	WP_019102028.1	permease-like cell division protein FtsX	-
OK026_RS10940 (OK026_10945)	rpoH	2417921..2418784 (+)	864	WP_019102027.1	RNA polymerase sigma factor RpoH	-
OK026_RS10945 (OK026_10950)	-	2418856..2420640 (-)	1785	WP_194427087.1	PglL family O-oligosaccharyltransferase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 40668.72 Da
• Isoelectric Point: 6.1724

>NTDB_id=750490 OK026_RS10925 WP_081555061.1 2414971..2416116(+) (pilA) [Chromobacterium haemolyticum strain UGAL515B_03]
MFSFFKRKPQSEPTPPTTVQTEPAADAQTIIPPEVAAPAIQQPETRAPEPQHSSAAPAEAVPASTRADTPPEPPQVSLKK
MSWAERLKAGLSKTRDKLGKSLAGLFGGGKIDEELYEELETVLLTADMGVDATQHLLDDVRERVSLKGLKDASELKDALK
GSLSDLISPLEKPLDVNGKKPFVIMMAGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLMAWGERNNVTVI
AQQGGDSAAVCYDAIQAAVARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEIILVLDANIGQNAITQVKT
FDDALGLTGLILSKLDGTAKGGVIAAIAKQRPVPLRFVGVGESIDDLRPFKAKDYIDALFD

Nucleotide

• Length: 1146 bp

>NTDB_id=750490 OK026_RS10925 WP_081555061.1 2414971..2416116(+) (pilA) [Chromobacterium haemolyticum strain UGAL515B_03]
ATGTTTAGCTTCTTCAAAAGAAAACCCCAGTCCGAGCCCACGCCCCCGACAACAGTCCAAACGGAGCCTGCGGCCGACGC
TCAAACCATCATCCCGCCCGAAGTGGCCGCCCCTGCCATCCAACAACCGGAAACACGCGCGCCCGAGCCGCAGCACTCCT
CGGCAGCACCCGCCGAAGCCGTCCCAGCCTCGACGCGCGCCGATACGCCGCCCGAGCCCCCTCAGGTTTCTCTGAAAAAA
ATGAGCTGGGCGGAACGGCTGAAAGCCGGCCTCTCAAAAACCCGCGACAAGCTGGGGAAATCCCTGGCTGGTCTGTTTGG
CGGCGGCAAGATCGACGAAGAGTTGTACGAGGAACTGGAAACCGTTCTGCTCACCGCCGACATGGGGGTGGACGCCACGC
AGCACCTGCTCGACGACGTGCGCGAGCGTGTTTCGCTGAAAGGGCTGAAGGATGCTTCTGAACTGAAAGACGCATTGAAA
GGGTCGCTCAGCGATTTGATCTCGCCACTGGAAAAACCGCTGGACGTTAACGGCAAGAAACCCTTCGTCATCATGATGGC
CGGCGTCAACGGCGCCGGCAAGACTACATCGATAGGCAAGCTGGCCAAGTACTATCAAAGCCAGGGCAAGAGCGTGTTGC
TGGCTGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAACAGCTGATGGCCTGGGGCGAGCGCAACAACGTCACCGTGATC
GCCCAGCAAGGGGGCGACTCCGCAGCCGTTTGCTACGACGCGATTCAAGCCGCGGTCGCCCGCGGCATCGACATCGTGCT
GGCAGATACCGCGGGCCGCCTGCCCACCCAACTGCACCTCATGGAAGAGATCAAGAAGGTGAAGCGGGTAATCCAAAAGG
CTTTGCCGGACGCGCCGCATGAAATCATCCTGGTTCTGGACGCCAATATCGGCCAGAACGCCATCACTCAGGTCAAGACT
TTTGACGACGCCCTCGGCCTGACCGGGCTAATCTTGAGCAAGCTGGACGGCACCGCCAAGGGCGGCGTAATCGCGGCCAT
CGCCAAGCAACGCCCCGTTCCGCTGCGCTTTGTCGGCGTGGGCGAAAGCATAGACGACCTGCGGCCGTTCAAGGCCAAGG
ACTACATCGACGCGCTGTTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (181-380)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-163)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.911	100	0.667