Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   OHU65_RS22470 Genome accession   NZ_CP109859
Coordinates   4298517..4300244 (-) Length   575 a.a.
NCBI ID   WP_221784559.1    Uniprot ID   -
Organism   Priestia megaterium strain 207     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4293517..4305244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU65_RS22450 (OHU65_22450) - 4293849..4294001 (+) 153 WP_064504589.1 YycC family protein -
  OHU65_RS22455 (OHU65_22455) - 4294315..4295646 (+) 1332 WP_221784558.1 peptide MFS transporter -
  OHU65_RS22460 (OHU65_22460) spo0A 4296038..4296826 (-) 789 WP_013084985.1 sporulation transcription factor Spo0A -
  OHU65_RS22465 (OHU65_22465) spoIVB 4297054..4298334 (-) 1281 WP_028411587.1 SpoIVB peptidase -
  OHU65_RS22470 (OHU65_22470) recN 4298517..4300244 (-) 1728 WP_221784559.1 DNA repair protein RecN Machinery gene
  OHU65_RS22475 (OHU65_22475) ahrC 4300261..4300710 (-) 450 WP_013059136.1 transcriptional regulator AhrC/ArgR -
  OHU65_RS22480 (OHU65_22480) - 4300873..4301700 (-) 828 WP_057233494.1 TlyA family RNA methyltransferase -
  OHU65_RS22485 (OHU65_22485) dxs 4301697..4303598 (-) 1902 WP_221784560.1 1-deoxy-D-xylulose-5-phosphate synthase -
  OHU65_RS22490 (OHU65_22490) - 4303919..4304815 (-) 897 WP_221784561.1 polyprenyl synthetase family protein -
  OHU65_RS22495 (OHU65_22495) - 4304815..4305048 (-) 234 WP_013059140.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 64678.21 Da        Isoelectric Point: 4.8309

>NTDB_id=750278 OHU65_RS22470 WP_221784559.1 4298517..4300244(-) (recN) [Priestia megaterium strain 207]
MLAELSIKNFAIIDELSVSFEKGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRHGTDRAEIEGLFLFDEEQHPSHEK
AKQVGLEVEDGMIVLRRDITTNGKSICRINGKLVTLAILREVGQTLIDIHGQHEHQDLMNQDRHLTLLDQYGGEKVEEAL
TEYREVFSRYTSLKKQLDQLTENEQQMAHRLDLIQFQLDEIKAANLQLNEDEELNEERLKISNFEKIYTSLNDAYNALHG
EHQGLDWVGVAMNHTEDISSLEKNYAEISEIISSSFYQLEDASYKIRQQLDLLEFDPKRLDFIEARLNEINHLKRKYGQS
VDEILEYAAQIEDEIDRIENRDTHVSKIKEQLNSVAQDLLVEANNVSAIRKKLAQELTDSIHHELQELYMAKTVFQIKFS
VVNAGKNDVEVNGERIKFTKDGIDNVEFYISTNPGEPLKPLAKVASGGELSRIMLALKSIFSKHQGVTSIIFDEVDTGVS
GRVAQSIGEKIHAISVDSQVLCISHLPQVAAMADTHLFIAKEVKGDRTTTSVLPLTLDEKVKEIGRMIAGAEITSLTKEH
AKELLDLADKMKHTI

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=750278 OHU65_RS22470 WP_221784559.1 4298517..4300244(-) (recN) [Priestia megaterium strain 207]
TTGTTAGCTGAATTATCCATTAAAAACTTTGCGATTATTGATGAACTTTCTGTTTCATTTGAAAAAGGCTTAACGGTATT
AACAGGCGAAACAGGAGCGGGGAAATCGATTATTATTGATGCCATTTCATTGTTAGTAGGTGGGAGAGGCTCTTCGGAGT
TTGTCCGCCACGGAACAGACAGAGCCGAAATTGAAGGACTTTTCTTATTTGATGAAGAACAGCATCCAAGTCATGAAAAA
GCCAAACAAGTCGGTTTGGAAGTGGAAGATGGAATGATTGTGCTTCGCCGAGATATCACTACAAATGGGAAAAGTATTTG
CCGCATCAACGGTAAGCTCGTAACGTTAGCTATCCTACGTGAAGTTGGACAGACGTTAATTGATATACATGGACAGCACG
AGCACCAAGATTTAATGAATCAAGATCGTCACTTAACTCTTCTTGATCAATATGGAGGAGAAAAAGTAGAAGAGGCTTTG
ACGGAGTATCGAGAGGTATTTTCTAGGTATACATCGCTAAAAAAGCAGCTCGATCAATTAACTGAAAATGAACAGCAGAT
GGCACATCGCCTCGATCTTATTCAATTTCAATTAGATGAAATCAAAGCGGCAAATTTGCAGCTGAACGAAGACGAGGAAC
TAAATGAAGAGCGTTTGAAGATTTCTAACTTTGAAAAGATCTATACGTCATTAAACGATGCATACAATGCGCTGCATGGT
GAACATCAAGGTTTAGATTGGGTAGGCGTAGCCATGAATCATACGGAGGATATTTCATCACTGGAAAAAAACTATGCCGA
AATTTCTGAGATCATTTCATCGAGCTTCTATCAGCTAGAAGACGCATCTTATAAAATTCGTCAGCAGCTTGATTTATTAG
AATTTGATCCCAAACGCTTAGACTTTATTGAAGCGCGCTTGAATGAAATTAATCACTTAAAGCGTAAATACGGTCAAAGT
GTAGACGAAATTCTAGAATATGCTGCACAAATTGAAGATGAAATTGATCGTATTGAAAATCGAGATACGCATGTGAGCAA
AATTAAAGAACAGTTAAACAGCGTAGCGCAGGATTTATTAGTAGAAGCTAATAACGTTTCAGCTATTCGAAAAAAACTTG
CTCAAGAGTTAACGGACAGCATCCATCATGAGCTTCAAGAACTGTATATGGCTAAGACCGTATTTCAAATTAAATTCTCT
GTTGTAAATGCAGGTAAAAATGACGTTGAAGTAAATGGAGAAAGAATAAAATTCACCAAAGACGGCATTGACAACGTAGA
GTTTTATATTTCTACCAATCCTGGTGAACCGTTAAAACCTCTTGCAAAAGTAGCATCAGGAGGAGAACTGTCAAGAATTA
TGCTGGCGTTAAAGAGCATCTTCTCTAAGCATCAAGGTGTGACGTCCATTATCTTTGATGAAGTTGATACAGGTGTAAGT
GGAAGAGTAGCTCAATCGATTGGTGAAAAAATACATGCTATTTCCGTTGATTCACAAGTTCTCTGTATATCTCATCTGCC
GCAGGTAGCAGCGATGGCAGATACTCATCTCTTTATTGCTAAAGAGGTAAAAGGTGATCGTACAACGACGTCTGTTCTTC
CATTAACTCTTGATGAAAAAGTAAAAGAAATTGGTCGAATGATTGCAGGAGCTGAAATTACAAGCTTAACAAAGGAACAT
GCCAAAGAGCTTTTAGATTTAGCGGATAAGATGAAGCACACCATTTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

64.931

100

0.65