Detailed information NTG0749627

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OHZ10_RS15270
• Genome accession: NZ_CP109821
• Coordinates: 3249157..3250314 (+)
• Length: 385 a.a.
• NCBI ID: WP_174994100.1
• Uniprot ID: A0A9Q9SNY3
• Organism: Burkholderia arboris strain PN-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3244157..3255314

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHZ10_RS15240 (OHZ10_15215)	-	3244796..3245401 (+)	606	WP_059233163.1	50S ribosomal protein L25/general stress protein Ctc	-
OHZ10_RS15245 (OHZ10_15220)	pth	3245522..3246121 (+)	600	WP_021163050.1	aminoacyl-tRNA hydrolase	-
OHZ10_RS15250 (OHZ10_15225)	hisC	3246240..3247307 (+)	1068	WP_342702930.1	histidinol-phosphate transaminase	-
OHZ10_RS15255 (OHZ10_15230)	-	3247390..3247656 (-)	267	WP_006477774.1	YfhL family 4Fe-4S dicluster ferredoxin	-
OHZ10_RS15260 (OHZ10_15235)	coaD	3247716..3248213 (-)	498	WP_021163047.1	pantetheine-phosphate adenylyltransferase	-
OHZ10_RS15265 (OHZ10_15240)	rsmD	3248325..3248939 (-)	615	WP_059233161.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OHZ10_RS15270 (OHZ10_15245)	pilA	3249157..3250314 (+)	1158	WP_174994100.1	signal recognition particle-docking protein FtsY	Machinery gene
OHZ10_RS15275 (OHZ10_15250)	maiA	3250400..3251044 (-)	645	WP_059236603.1	maleylacetoacetate isomerase	-
OHZ10_RS15280 (OHZ10_15255)	ybiB	3251224..3252198 (+)	975	WP_342702934.1	DNA-binding protein YbiB	-
OHZ10_RS15285 (OHZ10_15260)	leuA	3252579..3254228 (+)	1650	WP_059233158.1	2-isopropylmalate synthase	-
OHZ10_RS15290 (OHZ10_15265)	-	3254372..3254755 (-)	384	WP_059233157.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 41014.84 Da
• Isoelectric Point: 4.8019

>NTDB_id=749627 OHZ10_RS15270 WP_174994100.1 3249157..3250314(+) (pilA) [Burkholderia arboris strain PN-1]
MFSFFKRFKKSQEPDPAESQSADAQQADEPSDAAPARDAAPAADVPQAPVQPAAPAVVVTVTPTNDGRDEVVETVEIVPP
PLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRTARLTDPQQVK
DALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLSVWGERNN
VTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQIHLMEELKKVKRVISKAHDGAPHEVLLVIDANTGQNALT
QVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1158 bp

>NTDB_id=749627 OHZ10_RS15270 WP_174994100.1 3249157..3250314(+) (pilA) [Burkholderia arboris strain PN-1]
ATGTTCAGTTTCTTCAAACGATTCAAGAAATCGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAGCCGTCCGATGCCGCGCCTGCGCGCGATGCGGCGCCCGCGGCCGATGTGCCGCAAGCGCCCGTGCAACCGGCCG
CGCCGGCCGTCGTCGTGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCGCCG
CCGCTGCAGGACGCGTCGGCGAAGAAGTCCTGGCTCGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCATCAC
CGGCGTGTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGGGCG
TCGATGCGACCGAGTACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCACGGCCCGGCTGACCGACCCGCAGCAGGTGAAG
GACGCGCTGCATGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCTCGT
GATGATGATCACCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCGACC
AGTCGGTGCTGCTGGCCGCGGGCGACACGTTCCGCGCGGCCGCACGCGAGCAGCTCTCGGTCTGGGGCGAGCGCAACAAC
GTGACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAAGAT
CGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGATTCACCTGATGGAAGAGCTGAAGAAGGTGAAGCGCG
TGATCTCGAAGGCGCACGACGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCACTCACG
CAGGTGAAGGCATTCGACGACGCGCTCGGCCTCACCGGCCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGAT
CCTCGCCGCGATCGCGCGGCAACGACCGGTGCCCGTCTACTTCATCGGCGTCGGCGAAAAGGTCGAGGATCTGCAGCCGT
TCAGCGCGGTGGAATTCGCGGACGCGTTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (103-165)

• SRP54-type protein, GTPase domain (SRP54) (186-385)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.125	100	0.574