Detailed information NTG0749575

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: OH130_RS03305
• Genome accession: NZ_CP109817
• Coordinates: 653675..654619 (-)
• Length: 314 a.a.
• NCBI ID: WP_170878931.1
• Uniprot ID: -
• Organism: Campylobacter coli strain CC21NB01a
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 648675..659619

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH130_RS03280 (OH130_03280)	-	648778..649341 (+)	564	WP_002787747.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-
OH130_RS03285 (OH130_03285)	rfaD	649338..650291 (+)	954	WP_264378561.1	ADP-glyceromanno-heptose 6-epimerase	-
OH130_RS03290 (OH130_03290)	rfaE1	650284..651669 (+)	1386	WP_170878934.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
OH130_RS03295 (OH130_03295)	gmhA	651666..652226 (+)	561	WP_170878933.1	D-sedoheptulose 7-phosphate isomerase	-
OH130_RS03300 (OH130_03300)	-	652238..653692 (+)	1455	WP_170878932.1	hypothetical protein	-
OH130_RS03305 (OH130_03305)	waaF	653675..654619 (-)	945	WP_170878931.1	lipopolysaccharide heptosyltransferase II	Regulator
OH130_RS03310 (OH130_03310)	-	654678..655493 (+)	816	WP_170878930.1	glycosyltransferase family 2 protein	-
OH130_RS03315 (OH130_03315)	-	655512..655691 (-)	180	WP_264378562.1	hypothetical protein	-
OH130_RS03320 (OH130_03320)	-	655703..655927 (-)	225	WP_264378563.1	adenylyltransferase/cytidyltransferase family protein	-
OH130_RS03325 (OH130_03325)	-	655930..656979 (-)	1050	WP_139849864.1	asparagine synthase C-terminal domain-containing protein	-
OH130_RS03330 (OH130_03330)	-	656963..658279 (-)	1317	WP_170878929.1	hypothetical protein	-
OH130_RS03335 (OH130_03335)	-	658408..659607 (+)	1200	WP_170878928.1	glycosyltransferase family 8 protein	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36046.74 Da
• Isoelectric Point: 10.4093

>NTDB_id=749575 OH130_RS03305 WP_170878931.1 653675..654619(-) (waaF) [Campylobacter coli strain CC21NB01a]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILRILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHSKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNKNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEMVIKKLKFDI

Nucleotide

• Length: 945 bp

>NTDB_id=749575 OH130_RS03305 WP_170878931.1 653675..654619(-) (waaF) [Campylobacter coli strain CC21NB01a]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACGTATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTCTAAAGACTTAA
AACTTCCCTTTAAACTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTTATCACAAATGATAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATAAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAATGGTTATAAAAAAATTAAAATTTGACATTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (98-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.534	99.045	0.936