Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | OH128_RS03745 | Genome accession | NZ_CP109813 |
| Coordinates | 745559..745864 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain CC20JX12 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 740559..750864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OH128_RS03710 (OH128_03710) | - | 740974..741735 (+) | 762 | WP_072212081.1 | ATP-binding protein | - |
| OH128_RS03715 (OH128_03715) | - | 741732..742415 (+) | 684 | WP_228571089.1 | 3-methyladenine DNA glycosylase | - |
| OH128_RS03720 (OH128_03720) | thiD | 742415..743227 (+) | 813 | WP_002786353.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| OH128_RS03725 (OH128_03725) | thiE | 743217..743849 (+) | 633 | WP_002834515.1 | thiamine phosphate synthase | - |
| OH128_RS03730 (OH128_03730) | - | 743827..744456 (+) | 630 | WP_002783358.1 | uroporphyrinogen-III synthase | - |
| OH128_RS03735 (OH128_03735) | - | 744449..744901 (-) | 453 | WP_057040204.1 | hypothetical protein | - |
| OH128_RS03740 (OH128_03740) | - | 744898..745566 (-) | 669 | WP_002790524.1 | hypothetical protein | - |
| OH128_RS03745 (OH128_03745) | ctsT | 745559..745864 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| OH128_RS03750 (OH128_03750) | proC | 745861..746598 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| OH128_RS03755 (OH128_03755) | fliW | 746598..746987 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| OH128_RS03760 (OH128_03760) | - | 747152..747799 (+) | 648 | WP_002780248.1 | outer membrane protein assembly factor BamD | - |
| OH128_RS03765 (OH128_03765) | lon | 747815..750190 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| OH128_RS03770 (OH128_03770) | rpsR | 750246..750506 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=749552 OH128_RS03745 WP_002777852.1 745559..745864(-) (ctsT) [Campylobacter coli strain CC20JX12]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=749552 OH128_RS03745 WP_002777852.1 745559..745864(-) (ctsT) [Campylobacter coli strain CC20JX12]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |