Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FQS62_RS17090 Genome accession   NZ_CP109812
Coordinates   3692345..3692746 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. SBJS02     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3687345..3697746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FQS62_RS17075 (FQS62_017075) - 3689356..3691392 (-) 2037 WP_049445437.1 methyl-accepting chemotaxis protein -
  FQS62_RS17080 (FQS62_017080) - 3691434..3691964 (-) 531 WP_049445439.1 chemotaxis protein CheW -
  FQS62_RS17085 (FQS62_017085) - 3691964..3692326 (-) 363 WP_005410717.1 response regulator -
  FQS62_RS17090 (FQS62_017090) pilG 3692345..3692746 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  FQS62_RS17095 (FQS62_017095) gshB 3692987..3693933 (+) 947 Protein_3342 glutathione synthase -
  FQS62_RS17100 (FQS62_017100) - 3693933..3694817 (+) 885 WP_049445443.1 energy transducer TonB -
  FQS62_RS17105 (FQS62_017105) tsaB 3695326..3696039 (-) 714 WP_099589862.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=749529 FQS62_RS17090 WP_005418455.1 3692345..3692746(-) (pilG) [Stenotrophomonas sp. SBJS02]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=749529 FQS62_RS17090 WP_005418455.1 3692345..3692746(-) (pilG) [Stenotrophomonas sp. SBJS02]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAATACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677