Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FOF60_RS06740 Genome accession   NZ_CP109811
Coordinates   1365209..1367026 (+) Length   605 a.a.
NCBI ID   WP_192472286.1    Uniprot ID   -
Organism   Mesobacillus jeotgali strain SBJS01     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1360209..1372026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOF60_RS06720 (FOF60_06720) spxA 1360320..1360715 (+) 396 WP_167833817.1 transcriptional regulator SpxA -
  FOF60_RS06725 (FOF60_06725) mecA 1361334..1362005 (+) 672 WP_192472283.1 adaptor protein MecA -
  FOF60_RS06730 (FOF60_06730) cls 1362154..1363665 (+) 1512 WP_192472284.1 cardiolipin synthase -
  FOF60_RS06735 (FOF60_06735) - 1363840..1365042 (+) 1203 WP_192472285.1 competence protein CoiA -
  FOF60_RS06740 (FOF60_06740) pepF 1365209..1367026 (+) 1818 WP_192472286.1 oligoendopeptidase F Regulator
  FOF60_RS06745 (FOF60_06745) - 1367610..1367975 (-) 366 WP_192472287.1 hypothetical protein -
  FOF60_RS06750 (FOF60_06750) - 1367978..1368859 (-) 882 WP_192472288.1 ClpXP adapter SpxH family protein -
  FOF60_RS06755 (FOF60_06755) - 1368856..1369257 (-) 402 WP_192472289.1 globin -
  FOF60_RS06760 (FOF60_06760) - 1369642..1370286 (-) 645 WP_192472290.1 lytic transglycosylase domain-containing protein -
  FOF60_RS06765 (FOF60_06765) - 1370306..1370893 (-) 588 WP_192472291.1 CYTH domain-containing protein -
  FOF60_RS06770 (FOF60_06770) - 1371012..1371392 (+) 381 WP_225650241.1 hypothetical protein -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 69985.46 Da        Isoelectric Point: 4.7447

>NTDB_id=749489 FOF60_RS06740 WP_192472286.1 1365209..1367026(+) (pepF) [Mesobacillus jeotgali strain SBJS01]
MSNESAVKKLPVRDEVATENTWRLEDIFAVDEQWEKEFNEVKGLIPSVQEYQGKLGESAEQLYSALQLQDKLLERLGRLY
TYAHMRYDQDTTNSFYQGLDDRIKNLYSQAASALAFIVPEILAVDEEKIKGFLNEKEELKLYEHALEEINLQRPHVLSAE
EEALLAQASEVMSSPSNTFGMLNNADLEFPSIQDENGEDVEITHGRYIRFLESEDRRVREDAFKAVYKTYGSFKNTFAST
LSGNIKKDNFNARIRKYDSARHAALSANNIPESVYENLVNTVNDNLHLLHRYVKLRRKVLGLDKLHMYDLYTPLVKDVKM
EIPYGEAKEYVLKGLAPLGDEYNNILREGFENRWVDVYENKGKRSGAYSSGAYGTNPYILMNWQDNVNNLFTLAHEFGHS
VHSYYTRKTQPYPYGNYSIFVAEVASTCNEALLNDYMLKTIDDEQKRLYLLNHYLEGFRGTVFRQTMFAEFEHMIHQKAQ
NNEALTADSLTKDYYELNKKYFGEEDIIIDEEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGQPAVERYIEF
LKSGSSDYPIEVLKKAGVDMTSSKPIEEALKVFEEKLNEMEALLS

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=749489 FOF60_RS06740 WP_192472286.1 1365209..1367026(+) (pepF) [Mesobacillus jeotgali strain SBJS01]
ATGTCAAACGAATCTGCAGTTAAGAAATTGCCAGTAAGGGACGAGGTTGCCACAGAGAATACGTGGAGACTTGAGGATAT
TTTTGCAGTTGATGAACAATGGGAAAAAGAATTCAATGAAGTAAAGGGTTTGATTCCTTCTGTCCAGGAGTATCAGGGCA
AGCTGGGAGAAAGCGCTGAACAACTATATAGTGCACTTCAGCTTCAGGATAAATTGCTTGAGCGCCTTGGAAGACTTTAT
ACATACGCGCATATGCGCTATGACCAGGATACAACGAATTCTTTCTACCAGGGACTTGATGACCGCATCAAGAATCTGTA
TTCTCAAGCGGCGAGCGCGCTTGCCTTCATCGTACCAGAAATCCTGGCTGTTGATGAAGAGAAGATCAAGGGCTTTCTGA
ATGAAAAAGAAGAGCTCAAGCTTTATGAGCATGCATTGGAGGAAATCAATCTTCAGCGTCCGCATGTCTTATCCGCGGAA
GAGGAAGCACTCCTGGCTCAGGCTTCAGAGGTCATGAGCTCACCGTCAAATACATTCGGAATGCTGAACAATGCTGATCT
AGAATTCCCTTCAATCCAGGATGAGAACGGAGAAGATGTAGAAATCACACATGGCCGTTATATCCGATTCCTGGAAAGCG
AAGACCGCAGAGTTCGTGAAGATGCATTCAAAGCAGTGTATAAAACATATGGCAGTTTCAAGAATACTTTTGCCAGCACA
TTAAGCGGCAATATCAAAAAGGATAATTTCAATGCAAGAATTCGCAAGTATGACTCTGCGAGGCATGCTGCGCTGTCTGC
GAATAATATTCCTGAAAGTGTCTATGAGAATCTTGTGAATACGGTGAATGACAATCTGCACCTGCTTCACAGATATGTAA
AGCTTCGCAGGAAAGTACTGGGCTTGGATAAACTTCATATGTATGACCTTTACACACCGCTTGTTAAGGATGTGAAAATG
GAGATTCCTTATGGTGAAGCAAAGGAATATGTCCTAAAAGGTTTAGCGCCTCTTGGCGATGAATATAACAATATCCTTAG
AGAAGGATTTGAAAATCGCTGGGTGGATGTGTATGAGAACAAAGGGAAACGCAGCGGAGCTTATTCTTCAGGCGCATATG
GCACGAATCCATATATCCTGATGAACTGGCAGGACAATGTGAATAACTTGTTTACGCTGGCTCACGAGTTCGGACATTCC
GTACACAGCTACTATACAAGGAAGACACAGCCATATCCTTACGGCAACTACTCTATTTTTGTTGCTGAAGTGGCGTCTAC
TTGCAATGAAGCGTTATTGAATGACTATATGCTTAAAACAATCGATGATGAGCAGAAGCGTCTGTACCTTTTAAATCATT
ACCTCGAAGGCTTCCGTGGAACTGTATTCAGGCAGACTATGTTCGCTGAATTTGAACATATGATTCATCAAAAGGCTCAG
AATAACGAGGCATTGACAGCTGATTCATTGACAAAGGACTACTACGAGCTGAATAAAAAGTATTTTGGTGAAGAGGATAT
CATTATTGATGAAGAAATCGGTCTTGAGTGGTCAAGAATTCCGCATTTCTACTACAATTATTATGTATATCAGTATGCTA
CTGGCTTCAGTGCGGCAACTGCGCTGAGCAAACAGATCCTTGAAGAAGGACAGCCAGCAGTTGAGCGCTACATTGAATTC
TTGAAATCTGGCAGCTCGGATTATCCAATCGAGGTACTGAAAAAAGCAGGCGTCGACATGACTAGTTCAAAGCCAATTGA
GGAAGCATTGAAAGTCTTTGAAGAAAAGCTTAATGAAATGGAAGCACTGCTTTCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-591)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.171

96.86

0.486