Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   FOF60_RS06575 Genome accession   NZ_CP109811
Coordinates   1329762..1330712 (+) Length   316 a.a.
NCBI ID   WP_192472258.1    Uniprot ID   -
Organism   Mesobacillus jeotgali strain SBJS01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1324762..1335712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOF60_RS06555 (FOF60_06555) clpB 1324896..1327496 (+) 2601 WP_192472254.1 ATP-dependent chaperone ClpB -
  FOF60_RS06560 (FOF60_06560) - 1327537..1327725 (-) 189 WP_192472255.1 YjzD family protein -
  FOF60_RS06565 (FOF60_06565) - 1327985..1328722 (+) 738 WP_192472256.1 alpha/beta hydrolase -
  FOF60_RS06570 (FOF60_06570) - 1328791..1329618 (+) 828 WP_192472257.1 hypothetical protein -
  FOF60_RS06575 (FOF60_06575) med 1329762..1330712 (+) 951 WP_192472258.1 BMP family ABC transporter substrate-binding protein Regulator
  FOF60_RS06580 (FOF60_06580) comZ 1330737..1330925 (+) 189 WP_041967344.1 ComZ family protein Regulator
  FOF60_RS06585 (FOF60_06585) - 1330955..1331266 (-) 312 WP_192472259.1 hypothetical protein -
  FOF60_RS06590 (FOF60_06590) - 1331553..1332485 (+) 933 WP_192472260.1 beta-ketoacyl-ACP synthase III -
  FOF60_RS06595 (FOF60_06595) fabF 1332536..1333777 (+) 1242 WP_192472318.1 beta-ketoacyl-ACP synthase II -
  FOF60_RS06600 (FOF60_06600) - 1334538..1335521 (+) 984 WP_192472261.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35064.33 Da        Isoelectric Point: 4.4161

>NTDB_id=749484 FOF60_RS06575 WP_192472258.1 1329762..1330712(+) (med) [Mesobacillus jeotgali strain SBJS01]
MLKRFGLILLSLLLLGGCGQPLATGKVEKVGLLVPETINDQVWGTKGYRGLLQIQSSLEVDVFFKEGMNSQEAVEAAVRE
FDRQGVNLIYGHGNEYAAYFNKISGEYPDIHFISFNGDARAKNTTSLNFKAYAMGFFGGMVASHMSETGKVGIIAAYEWQ
PEVEGFYDGAIFENEDMKVDIRYVGHWDDQKKALDVLDDVLDDGADVIYPAGDGYNVPVIERVKDRGLYIIGYISDQSDF
GESTVLTSTVQHVDDLYELTADKFNNGELKSGNLSFDFQDGVISLGKFSPKVDANFRERVGTYINSYKENGKLPNQ

Nucleotide


Download         Length: 951 bp        

>NTDB_id=749484 FOF60_RS06575 WP_192472258.1 1329762..1330712(+) (med) [Mesobacillus jeotgali strain SBJS01]
ATGCTGAAACGTTTCGGGCTAATATTGTTAAGCCTTCTTTTGCTTGGGGGATGCGGACAACCACTAGCAACTGGCAAGGT
GGAGAAAGTCGGCCTGTTGGTGCCTGAAACTATTAATGATCAGGTGTGGGGGACGAAAGGATATCGTGGACTTCTGCAAA
TCCAATCCAGCCTGGAGGTTGATGTCTTTTTCAAAGAAGGAATGAATTCGCAGGAAGCTGTAGAGGCTGCGGTGAGGGAG
TTTGACAGGCAGGGAGTCAACCTTATTTATGGGCATGGAAATGAATACGCAGCCTATTTCAATAAAATTTCAGGGGAATA
TCCTGATATACATTTCATTAGCTTTAATGGGGATGCCAGGGCAAAAAATACGACAAGCTTGAATTTTAAGGCATATGCCA
TGGGCTTTTTTGGCGGAATGGTCGCGAGCCACATGTCTGAAACCGGCAAAGTCGGAATCATTGCAGCATATGAATGGCAG
CCTGAAGTGGAAGGCTTTTACGATGGAGCAATCTTTGAAAACGAAGATATGAAGGTGGACATACGTTATGTTGGGCACTG
GGATGACCAAAAAAAGGCACTCGATGTCCTGGATGATGTTCTGGATGACGGAGCTGATGTCATATATCCTGCTGGAGATG
GGTATAATGTACCTGTCATTGAAAGAGTAAAGGACCGAGGCTTGTATATTATCGGTTATATTTCAGACCAGTCGGATTTC
GGTGAATCGACGGTATTGACGAGTACTGTCCAGCATGTTGATGACTTGTATGAATTGACGGCCGATAAGTTTAATAATGG
GGAGCTTAAATCTGGCAACCTGTCATTCGACTTTCAGGATGGTGTTATTTCTCTGGGGAAGTTCAGTCCTAAAGTCGATG
CCAACTTCAGGGAAAGAGTAGGCACTTATATTAACTCTTATAAAGAAAACGGTAAATTGCCCAACCAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.503

99.367

0.532