Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   FOF60_RS03660 Genome accession   NZ_CP109811
Coordinates   729800..730750 (+) Length   316 a.a.
NCBI ID   WP_192469720.1    Uniprot ID   -
Organism   Mesobacillus jeotgali strain SBJS01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 724800..735750
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOF60_RS03635 (FOF60_03635) - 725132..725515 (+) 384 WP_192469724.1 GntR family transcriptional regulator -
  FOF60_RS03640 (FOF60_03640) - 725512..726417 (+) 906 WP_319801565.1 ABC transporter ATP-binding protein -
  FOF60_RS03645 (FOF60_03645) - 726392..727144 (+) 753 WP_192469723.1 hypothetical protein -
  FOF60_RS03650 (FOF60_03650) - 727141..727833 (+) 693 WP_192469722.1 hypothetical protein -
  FOF60_RS03655 (FOF60_03655) - 727925..728983 (+) 1059 WP_192469721.1 aromatic acid exporter family protein -
  FOF60_RS03660 (FOF60_03660) ceuB 729800..730750 (+) 951 WP_192469720.1 ABC transporter permease Machinery gene
  FOF60_RS03665 (FOF60_03665) - 730743..731693 (+) 951 WP_192469719.1 iron chelate uptake ABC transporter family permease subunit -
  FOF60_RS03670 (FOF60_03670) - 731690..732451 (+) 762 WP_192469718.1 ABC transporter ATP-binding protein -
  FOF60_RS03675 (FOF60_03675) - 732470..733414 (+) 945 WP_192469717.1 siderophore ABC transporter substrate-binding protein -
  FOF60_RS03680 (FOF60_03680) - 733414..733716 (+) 303 WP_192469716.1 antibiotic biosynthesis monooxygenase family protein -
  FOF60_RS03685 (FOF60_03685) - 734204..734368 (-) 165 WP_192469715.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34921.22 Da        Isoelectric Point: 10.1767

>NTDB_id=749477 FOF60_RS03660 WP_192469720.1 729800..730750(+) (ceuB) [Mesobacillus jeotgali strain SBJS01]
MKKRYLITSLIILSLLSLFVGVSRITPMELLDFQSEETEIFLISRVPRLIAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLFFANASTIEKMLIAFVFALAGTFLFMQILDRIKFKDAIFIPLVGMMLGNILSSISTFFAYKADVI
QNMSAWLQGDFSMVMKGRYELLYISIPILVIAYLFANRFTVAGMGEDFSKNLGLAYKRVVNIGLILVALITATVVLTVGM
IPFLGLIIPNIVSIFKGDHLQKTLPHTALLGANFLLVTDILGRMLIYPYEISISLMVGVIGSGIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=749477 FOF60_RS03660 WP_192469720.1 729800..730750(+) (ceuB) [Mesobacillus jeotgali strain SBJS01]
ATGAAAAAGCGTTACTTGATTACATCTTTGATCATCCTTTCATTGCTTTCACTCTTTGTAGGAGTAAGCAGAATCACACC
AATGGAACTGCTTGATTTTCAGTCGGAAGAAACAGAAATCTTCCTGATCAGCAGGGTACCGCGCTTGATTGCAATCCTCC
TTGCCGGCGCAGGGATGAGCATAGCCGGACTGATCATGCAGCAGTTGAGCCGCAATAAGTTCGTGTCACCGACAACGGCG
GGCACGCTCGATGCGACAAGATTGGGCATTCTCGTTTCGATGCTGTTTTTTGCAAACGCGTCCACGATTGAAAAAATGCT
GATTGCGTTTGTGTTCGCACTGGCGGGAACATTCTTGTTCATGCAGATTCTTGACCGGATCAAGTTCAAGGACGCGATTT
TCATTCCGCTTGTCGGGATGATGCTGGGTAATATCCTATCATCCATATCGACATTCTTTGCTTACAAAGCCGATGTTATC
CAGAACATGTCCGCGTGGCTGCAGGGTGATTTTTCGATGGTCATGAAGGGGCGCTATGAGCTGCTGTACATAAGCATTCC
GATCCTGGTGATTGCCTATCTTTTCGCCAATCGCTTTACGGTGGCGGGGATGGGAGAAGATTTTTCGAAGAACTTGGGGC
TCGCCTACAAACGGGTCGTCAACATCGGATTGATCCTTGTCGCTCTGATTACGGCCACTGTCGTCCTGACGGTCGGAATG
ATTCCGTTCCTCGGGCTGATCATCCCGAATATCGTCTCAATTTTCAAAGGCGACCATCTGCAAAAAACATTGCCGCATAC
GGCTTTGCTGGGAGCGAATTTCCTCCTGGTAACGGACATCCTGGGACGCATGCTGATCTATCCTTACGAGATTTCGATCT
CTCTGATGGTCGGCGTCATCGGCAGTGGAATTTTCTTGTACCTGTTGTTTAGGAGGAAGGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.355

99.051

0.528