Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   QBL21_RS32185 Genome accession   NZ_CP123230
Coordinates   7560335..7562080 (-) Length   581 a.a.
NCBI ID   WP_407565746.1    Uniprot ID   -
Organism   Streptomyces sp. 184     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 7555335..7567080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QBL21_RS32165 (QBL21_32155) - 7555639..7556376 (-) 738 WP_407565744.1 response regulator transcription factor -
  QBL21_RS32170 (QBL21_32160) - 7556572..7557582 (+) 1011 WP_407565745.1 alpha/beta hydrolase family protein -
  QBL21_RS32175 (QBL21_32165) - 7557570..7558159 (-) 590 Protein_6365 Uma2 family endonuclease -
  QBL21_RS32180 (QBL21_32170) rcrQ 7558251..7560089 (-) 1839 WP_407566641.1 ABC transporter ATP-binding protein Regulator
  QBL21_RS32185 (QBL21_32175) rcrP 7560335..7562080 (-) 1746 WP_407565746.1 ABC transporter ATP-binding protein Regulator
  QBL21_RS32190 (QBL21_32180) - 7562222..7562479 (+) 258 WP_407565747.1 MoaD/ThiS family protein -
  QBL21_RS32195 (QBL21_32185) - 7562487..7564301 (+) 1815 WP_407565748.1 hypothetical protein -
  QBL21_RS32200 (QBL21_32190) - 7564405..7565133 (+) 729 WP_407565749.1 DUF2993 domain-containing protein -
  QBL21_RS32205 (QBL21_32195) - 7565348..7565488 (+) 141 WP_407565750.1 putative leader peptide -
  QBL21_RS32210 (QBL21_32200) - 7565655..7566494 (+) 840 WP_407565751.1 sulfurtransferase -
  QBL21_RS32215 (QBL21_32205) - 7566540..7566827 (+) 288 WP_407565752.1 DUF1416 domain-containing protein -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 63062.24 Da        Isoelectric Point: 8.2458

>NTDB_id=749413 QBL21_RS32185 WP_407565746.1 7560335..7562080(-) (rcrP) [Streptomyces sp. 184]
MLVRILRAHLRPYRRDLAWVVALQLIATLTTLYLPTLNADIINHGVIPGDNGYIVRTGGWMVAFSVLQLCAAGGAVFFGA
RTATALGRDVRAAVFDRVQSFSAREVAHFGAPSLITRTTNDVQQIQMLALMTFTMMVTAPIMCVGGVVMALNQDVPLTSL
LLVVVPLLGVVMALIVRRMRPLFRSMQKRIDEVNRVMREQITGIRVIRAFVRDEHERRRFGKANADLRDVGTRAGRLMAL
LFPTPMFAMNLSSVAVVWFAAGRIDSGAMDVGALTAFLSYLMYILSSVMMATFMFMMIPRAEVCAERIQEVLDTESSVVP
PAAPVPAATEPRERGRLDVRGVEFRYPGAEEPVLKDVDLVARPGRTTAVIGSTGSGKSTLLALVPRLFDATAGSVAVGGV
DVRDLDPAALALAIGYVPQKPYLFSGTVESNLRYGKPDATEDELWDALRTAQAEDFVRAMDGGLDAPVAQGGSNVSGGQR
QRLAIARALVHRPDIYLFDDSFSALDYATDAALRTALTRRLGDATVVIVAQRVATIRDADRIVVLDEGRVAGTGTHAELM
AANETYREIVLSQLTEKEAAA

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=749413 QBL21_RS32185 WP_407565746.1 7560335..7562080(-) (rcrP) [Streptomyces sp. 184]
GTGCTCGTCCGAATCCTCCGCGCCCACCTGCGCCCGTACCGCCGGGACCTCGCCTGGGTCGTGGCGCTCCAGTTGATCGC
CACCCTGACGACGCTCTACCTCCCCACCCTCAACGCCGACATCATCAACCACGGCGTCATCCCGGGCGACAACGGCTACA
TCGTGCGCACCGGCGGCTGGATGGTCGCCTTCAGCGTGCTCCAGCTCTGCGCCGCCGGCGGCGCCGTGTTCTTCGGCGCC
CGTACGGCCACCGCCCTCGGCCGCGACGTGCGCGCCGCCGTCTTCGACCGCGTGCAGTCCTTCTCCGCCCGCGAGGTGGC
CCACTTCGGCGCCCCGTCCCTGATCACCCGCACCACCAACGACGTGCAGCAGATCCAGATGCTCGCCCTGATGACGTTCA
CGATGATGGTGACGGCGCCGATCATGTGCGTCGGCGGGGTCGTCATGGCGCTCAACCAGGACGTGCCGCTGACGTCCCTG
CTGCTGGTCGTCGTGCCGCTGCTGGGCGTCGTCATGGCGCTGATCGTGCGCCGGATGCGCCCGCTGTTCCGCAGCATGCA
GAAGCGCATCGACGAGGTGAACCGCGTCATGCGCGAGCAGATCACCGGCATCCGCGTCATCCGCGCCTTCGTCCGCGACG
AGCACGAGCGGCGCCGCTTCGGCAAGGCCAACGCCGACCTGCGGGACGTGGGGACCCGGGCCGGCCGGCTCATGGCGCTG
CTGTTCCCCACCCCGATGTTCGCCATGAACCTGTCGAGCGTCGCCGTGGTCTGGTTCGCGGCCGGACGGATCGACAGCGG
CGCCATGGACGTCGGCGCGCTGACGGCGTTCCTGTCCTATCTCATGTACATCCTCAGCAGCGTCATGATGGCCACCTTCA
TGTTCATGATGATCCCGCGCGCGGAGGTCTGCGCCGAGCGGATCCAGGAGGTGCTGGACACCGAGTCGTCCGTCGTCCCG
CCGGCGGCACCGGTGCCCGCGGCGACCGAGCCGCGCGAGCGCGGCCGGCTCGACGTCCGCGGCGTCGAGTTCCGCTACCC
GGGCGCCGAGGAGCCGGTGCTCAAGGACGTCGACCTGGTGGCACGCCCGGGGCGTACGACGGCGGTCATCGGCAGCACGG
GCAGCGGCAAGTCGACGCTGCTGGCCCTGGTGCCGCGGCTGTTCGACGCCACGGCGGGCAGCGTCGCCGTCGGGGGCGTG
GACGTACGGGACCTGGACCCGGCGGCGCTGGCGCTGGCCATCGGGTACGTACCGCAGAAGCCGTACCTCTTCAGCGGCAC
CGTCGAATCAAACCTCCGCTACGGAAAACCCGACGCCACCGAGGACGAGCTGTGGGACGCGCTGCGCACGGCGCAGGCCG
AGGACTTCGTCCGCGCCATGGACGGCGGCCTCGACGCGCCCGTCGCGCAGGGCGGCTCGAACGTCTCCGGCGGCCAGCGG
CAGCGCCTCGCGATCGCCCGCGCGCTGGTGCACCGGCCCGACATCTACCTCTTCGACGACTCCTTCTCCGCCCTCGACTA
CGCCACGGACGCCGCCCTGCGCACGGCGCTCACGCGCCGGCTCGGGGACGCGACGGTCGTGATCGTCGCCCAGCGGGTCG
CGACGATCCGCGACGCGGACCGGATCGTGGTCCTGGACGAGGGCCGGGTGGCGGGTACGGGCACGCACGCGGAGCTGATG
GCGGCGAACGAGACGTACCGGGAGATCGTGCTCTCGCAGCTCACGGAGAAGGAGGCGGCGGCATGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(21-287)

ABC transporter (ABC_tran)

(354-501)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

37.456

97.418

0.365