Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   OKL56_RS09795 Genome accession   NZ_CP109802
Coordinates   2080155..2081834 (-) Length   559 a.a.
NCBI ID   WP_010719788.1    Uniprot ID   A0A1V8X977
Organism   Enterococcus hirae strain T16-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2075155..2086834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKL56_RS09765 (OKL56_09765) ftsL 2076183..2076578 (-) 396 WP_010719782.1 cell division protein FtsL -
  OKL56_RS09770 (OKL56_09770) rsmH 2076583..2077542 (-) 960 WP_010738202.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  OKL56_RS09775 (OKL56_09775) mraZ 2077563..2077994 (-) 432 WP_014834189.1 division/cell wall cluster transcriptional repressor MraZ -
  OKL56_RS09780 (OKL56_09780) - 2078166..2078534 (-) 369 WP_010719785.1 DUF3397 domain-containing protein -
  OKL56_RS09785 (OKL56_09785) - 2078790..2079746 (+) 957 WP_010738203.1 magnesium transporter CorA family protein -
  OKL56_RS09790 (OKL56_09790) - 2079816..2079932 (+) 117 WP_010719787.1 DUF4044 domain-containing protein -
  OKL56_RS09795 (OKL56_09795) recN 2080155..2081834 (-) 1680 WP_010719788.1 DNA repair protein RecN Machinery gene
  OKL56_RS09800 (OKL56_09800) argR 2081852..2082301 (-) 450 WP_010719789.1 arginine repressor -
  OKL56_RS09805 (OKL56_09805) - 2082401..2083219 (-) 819 WP_010738204.1 TlyA family RNA methyltransferase -
  OKL56_RS09810 (OKL56_09810) - 2083234..2084118 (-) 885 WP_010719791.1 polyprenyl synthetase family protein -
  OKL56_RS09815 (OKL56_09815) - 2084118..2084342 (-) 225 WP_010719792.1 exodeoxyribonuclease VII small subunit -
  OKL56_RS09820 (OKL56_09820) xseA 2084348..2085688 (-) 1341 WP_010738205.1 exodeoxyribonuclease VII large subunit -
  OKL56_RS09825 (OKL56_09825) - 2085689..2086534 (-) 846 WP_010738206.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 559 a.a.        Molecular weight: 63022.25 Da        Isoelectric Point: 4.5725

>NTDB_id=749348 OKL56_RS09795 WP_010719788.1 2080155..2081834(-) (recN) [Enterococcus hirae strain T16-1]
MLQEISITNFAIIPELHLSFHKGMTALTGETGAGKSIIIDALGLLAGGRGSSDYIRQGADKCILEGLFEWPSQEGFTELM
EELGIESDGDNLIVRRDMALTGKNVCRVNGHIVTLANLRRIGSYLVDIQGQNEHQELLQPEAHLNLLDRFGDRTFQQQKK
KYQKEYAIYRELERKMRKVQQNEKSFVQRIDMLHFQQEEIAAADLQVGEEEQLSEEREKLSNYQKIVDSFASGYSALSAG
EPSSVDNVGLAVSELQSIAHLDNEYEAIVENVQSAYYLLQDAIGDMSRQIDLLELDENRLEEVNQRLELIRQLKRKYGES
VEAILDYYEEITKELDSSDFSEGQLEKMQLELTKKETFLQEQALALHKTRKKIAKELEKSILTELKSLYMENTEFEVRFS
SEKNGQLDANGLDQVEFYITTNPGEPLKPLVKVASGGELSRMLLALKTIFSSEQGVTSIIFDEVDTGVSGRVAQAIADKI
SQISCHSQVLCITHLPQVAAVADFQYYIQKEVIDGRTQTSVTELQPTQRETEIARMLAGSEITPLTVEHAKELLRLASK

Nucleotide


Download         Length: 1680 bp        

>NTDB_id=749348 OKL56_RS09795 WP_010719788.1 2080155..2081834(-) (recN) [Enterococcus hirae strain T16-1]
TTGTTACAAGAGATCAGTATTACTAATTTTGCGATTATTCCGGAATTGCATTTGTCTTTCCATAAAGGAATGACAGCTCT
AACTGGCGAGACCGGGGCAGGTAAATCGATTATCATTGATGCCCTTGGATTACTGGCTGGTGGTAGAGGCTCCAGTGATT
ATATTCGCCAAGGAGCCGATAAGTGTATCTTAGAAGGGTTGTTTGAATGGCCAAGTCAAGAAGGATTTACTGAATTGATG
GAAGAACTGGGCATCGAATCAGATGGTGATAACTTGATTGTTCGTCGTGATATGGCATTAACGGGTAAAAATGTCTGCCG
AGTCAATGGACATATTGTTACGCTGGCAAACCTTAGAAGGATCGGAAGTTATCTAGTTGATATTCAAGGACAAAATGAAC
ACCAGGAGCTATTACAACCAGAAGCCCATTTAAATTTATTGGATCGTTTTGGTGATCGTACTTTTCAACAACAAAAGAAA
AAATATCAAAAAGAGTATGCTATCTATCGTGAGCTCGAACGAAAAATGCGGAAAGTCCAACAAAATGAAAAATCATTTGT
TCAACGGATCGACATGCTTCATTTTCAACAAGAAGAAATCGCAGCAGCTGATTTACAAGTTGGCGAAGAGGAACAGTTAA
GCGAGGAAAGAGAAAAATTAAGCAATTATCAAAAGATCGTGGATAGTTTTGCTAGTGGTTATAGTGCATTGAGTGCGGGA
GAACCCAGTAGTGTGGATAACGTTGGTTTAGCTGTTTCTGAACTACAAAGCATTGCTCATCTAGATAATGAATATGAAGC
AATCGTTGAGAATGTTCAAAGTGCTTATTATTTACTTCAAGATGCCATTGGTGACATGAGTCGCCAAATCGATCTGTTGG
AATTGGATGAAAACCGATTAGAAGAAGTCAATCAACGGCTTGAATTGATTCGTCAGTTGAAACGCAAATATGGGGAGTCA
GTGGAAGCAATCCTTGATTATTACGAAGAAATCACTAAAGAACTGGATTCTTCTGATTTCTCAGAAGGTCAACTAGAAAA
AATGCAACTGGAATTAACTAAAAAAGAAACGTTCTTGCAAGAACAAGCATTAGCACTGCATAAAACAAGAAAAAAAATTG
CTAAAGAACTAGAAAAATCAATCTTAACGGAATTAAAAAGTCTATATATGGAAAACACTGAGTTTGAAGTCCGTTTTTCA
TCTGAAAAAAATGGACAATTAGATGCTAATGGATTGGACCAAGTGGAATTTTACATAACCACAAATCCTGGAGAACCATT
GAAGCCATTAGTAAAAGTTGCCTCGGGTGGGGAACTATCACGTATGTTGTTGGCGTTAAAAACTATTTTTTCTTCAGAAC
AAGGTGTGACTAGTATCATTTTTGATGAAGTGGATACAGGAGTAAGCGGCCGAGTTGCCCAAGCGATTGCAGATAAGATC
TCACAGATCTCATGTCACTCACAAGTTTTGTGTATCACCCATTTACCGCAAGTCGCTGCAGTTGCCGATTTTCAATACTA
TATTCAAAAAGAAGTCATTGATGGGCGTACCCAAACATCGGTTACCGAACTACAACCCACACAACGAGAAACCGAAATTG
CCCGAATGTTAGCTGGAAGTGAAATTACCCCATTAACAGTCGAGCATGCCAAAGAATTATTACGCTTAGCAAGTAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V8X977

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

49.476

100

0.506