Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | L0P93_RS09215 | Genome accession | NZ_CP109795 |
| Coordinates | 1764228..1765127 (+) | Length | 299 a.a. |
| NCBI ID | WP_014417764.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain B19 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1746693..1799189 | 1764228..1765127 | within | 0 |
Gene organization within MGE regions
Location: 1746693..1799189
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0P93_RS09120 (L0P93_09135) | acpP | 1746772..1747005 (+) | 234 | WP_003154310.1 | acyl carrier protein | - |
| L0P93_RS09125 (L0P93_09140) | rncS | 1747144..1747893 (+) | 750 | WP_014417754.1 | ribonuclease III | - |
| L0P93_RS09130 (L0P93_09145) | smc | 1747995..1751555 (+) | 3561 | WP_029973477.1 | chromosome segregation protein SMC | - |
| L0P93_RS09135 (L0P93_09150) | ftsY | 1751575..1752564 (+) | 990 | WP_003154301.1 | signal recognition particle-docking protein FtsY | - |
| L0P93_RS09140 (L0P93_09155) | - | 1752648..1753418 (+) | 771 | WP_025649467.1 | aminoglycoside phosphotransferase family protein | - |
| L0P93_RS09145 (L0P93_09160) | - | 1753540..1753872 (+) | 333 | WP_003154299.1 | putative DNA-binding protein | - |
| L0P93_RS09150 (L0P93_09165) | ffh | 1753886..1755226 (+) | 1341 | WP_265606280.1 | signal recognition particle protein | - |
| L0P93_RS09155 (L0P93_09170) | rpsP | 1755332..1755604 (+) | 273 | WP_003154296.1 | 30S ribosomal protein S16 | - |
| L0P93_RS09160 (L0P93_09175) | - | 1755604..1755849 (+) | 246 | WP_007611392.1 | KH domain-containing protein | - |
| L0P93_RS09165 (L0P93_09180) | - | 1755940..1756326 (+) | 387 | WP_003154291.1 | YlqD family protein | - |
| L0P93_RS09170 (L0P93_09185) | rimM | 1756331..1756855 (+) | 525 | WP_277161326.1 | ribosome maturation factor RimM | - |
| L0P93_RS09175 (L0P93_09190) | trmD | 1756852..1757583 (+) | 732 | WP_022553353.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| L0P93_RS09180 (L0P93_09195) | rplS | 1757724..1758071 (+) | 348 | WP_003154288.1 | 50S ribosomal protein L19 | - |
| L0P93_RS09185 (L0P93_09200) | ylqF | 1758214..1759062 (+) | 849 | WP_007611396.1 | ribosome biogenesis GTPase YlqF | - |
| L0P93_RS09190 (L0P93_09205) | - | 1759135..1759902 (+) | 768 | WP_029973475.1 | ribonuclease HII | - |
| L0P93_RS09195 (L0P93_09210) | - | 1759919..1761622 (+) | 1704 | WP_277161327.1 | glycosyl transferase | - |
| L0P93_RS09200 (L0P93_09215) | - | 1761619..1761900 (+) | 282 | WP_014417762.1 | FlhB-like flagellar biosynthesis protein | - |
| L0P93_RS09205 (L0P93_09220) | sucC | 1762075..1763232 (+) | 1158 | WP_003154283.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| L0P93_RS09210 (L0P93_09225) | sucD | 1763261..1764163 (+) | 903 | WP_014417763.1 | succinate--CoA ligase subunit alpha | - |
| L0P93_RS09215 (L0P93_09230) | dprA | 1764228..1765127 (+) | 900 | WP_014417764.1 | DNA-processing protein DprA | Machinery gene |
| L0P93_RS09220 (L0P93_09235) | topA | 1765309..1767384 (+) | 2076 | WP_014417765.1 | type I DNA topoisomerase | - |
| L0P93_RS09225 (L0P93_09240) | trmFO | 1767449..1768756 (+) | 1308 | WP_029973471.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| L0P93_RS09230 (L0P93_09245) | xerC | 1768826..1769743 (+) | 918 | WP_007409774.1 | tyrosine recombinase XerC | - |
| L0P93_RS09235 (L0P93_09250) | hslV | 1769759..1770301 (+) | 543 | WP_277161328.1 | ATP-dependent protease subunit HslV | - |
| L0P93_RS09240 (L0P93_09255) | hslU | 1770318..1771719 (+) | 1402 | Protein_1760 | HslU--HslV peptidase ATPase subunit | - |
| L0P93_RS09245 (L0P93_09260) | codY | 1771757..1772535 (+) | 779 | Protein_1761 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| L0P93_RS09250 (L0P93_09265) | flgB | 1772889..1773278 (+) | 390 | WP_003154260.1 | flagellar basal body rod protein FlgB | - |
| L0P93_RS09255 (L0P93_09270) | flgC | 1773278..1773730 (+) | 453 | WP_015239851.1 | flagellar basal body rod protein FlgC | - |
| L0P93_RS09260 (L0P93_09275) | fliE | 1773741..1774061 (+) | 321 | WP_029973469.1 | flagellar hook-basal body complex protein FliE | - |
| L0P93_RS09265 (L0P93_09280) | fliF | 1774104..1775714 (+) | 1611 | WP_099721951.1 | flagellar basal-body MS-ring/collar protein FliF | - |
| L0P93_RS09270 (L0P93_09285) | fliG | 1775727..1776743 (+) | 1017 | WP_003154256.1 | flagellar motor switch protein FliG | - |
| L0P93_RS09275 (L0P93_09290) | fliH | 1776736..1777491 (+) | 756 | WP_017417778.1 | flagellar assembly protein FliH | - |
| L0P93_RS09280 (L0P93_09295) | fliI | 1777488..1778804 (+) | 1317 | WP_007611430.1 | flagellar protein export ATPase FliI | - |
| L0P93_RS09285 (L0P93_09300) | fliJ | 1778810..1779253 (+) | 444 | WP_003154253.1 | flagellar export protein FliJ | - |
| L0P93_RS09290 (L0P93_09305) | - | 1779265..1779874 (+) | 610 | Protein_1770 | MotE family protein | - |
| L0P93_RS09295 (L0P93_09310) | - | 1779881..1781224 (+) | 1344 | WP_029973466.1 | flagellar hook-length control protein FliK | - |
| L0P93_RS09300 (L0P93_09315) | flgD | 1781225..1781665 (+) | 441 | WP_029973465.1 | flagellar hook assembly protein FlgD | - |
| L0P93_RS09305 (L0P93_09320) | flgG | 1781690..1782466 (+) | 777 | WP_007409783.1 | flagellar basal body rod protein FlgG | - |
| L0P93_RS09310 (L0P93_09325) | - | 1782506..1782721 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| L0P93_RS09315 (L0P93_09330) | fliL | 1782718..1783137 (+) | 420 | WP_021493686.1 | flagellar basal body-associated protein FliL | - |
| L0P93_RS09320 (L0P93_09335) | fliM | 1783171..1784169 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| L0P93_RS09325 (L0P93_09340) | fliY | 1784159..1785295 (+) | 1137 | WP_021493685.1 | flagellar motor switch phosphatase FliY | - |
| L0P93_RS09330 (L0P93_09345) | cheY | 1785322..1785684 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | - |
| L0P93_RS09335 (L0P93_09350) | fliZ | 1785699..1786352 (+) | 654 | WP_022553343.1 | flagella biosynthesis regulatory protein FliZ | - |
| L0P93_RS09340 (L0P93_09355) | fliP | 1786345..1787010 (+) | 666 | WP_007409786.1 | flagellar type III secretion system pore protein FliP | - |
| L0P93_RS09345 (L0P93_09360) | fliQ | 1787025..1787294 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| L0P93_RS09350 (L0P93_09365) | fliR | 1787301..1788080 (+) | 780 | WP_014417775.1 | flagellar biosynthetic protein FliR | - |
| L0P93_RS09355 (L0P93_09370) | flhB | 1788080..1789159 (+) | 1080 | WP_014417776.1 | flagellar biosynthesis protein FlhB | - |
| L0P93_RS09360 (L0P93_09375) | flhA | 1789193..1791226 (+) | 2034 | WP_277161329.1 | flagellar biosynthesis protein FlhA | - |
| L0P93_RS09365 (L0P93_09380) | flhF | 1791226..1792314 (+) | 1089 | WP_277161330.1 | flagellar biosynthesis protein FlhF | - |
| L0P93_RS09370 (L0P93_09385) | - | 1792311..1793204 (+) | 894 | WP_104679021.1 | MinD/ParA family protein | - |
| L0P93_RS09375 (L0P93_09390) | - | 1793201..1794268 (+) | 1068 | WP_007409791.1 | chemotaxis response regulator protein-glutamate methylesterase | - |
| L0P93_RS09380 (L0P93_09395) | cheA | 1794274..1796292 (+) | 2019 | WP_021493681.1 | chemotaxis protein CheA | - |
| L0P93_RS09385 (L0P93_09400) | cheW | 1796315..1796788 (+) | 474 | WP_003154225.1 | chemotaxis protein CheW | - |
| L0P93_RS09390 (L0P93_09405) | cheC | 1796804..1797433 (+) | 630 | WP_014417781.1 | CheY-P phosphatase CheC | - |
| L0P93_RS09395 (L0P93_09410) | cheD | 1797430..1797929 (+) | 500 | Protein_1791 | chemoreceptor glutamine deamidase CheD | - |
| L0P93_RS09400 (L0P93_09415) | sigD | 1797956..1798720 (+) | 765 | WP_003154217.1 | RNA polymerase sigma-28 factor SigD | - |
Sequence
Protein
Download Length: 299 a.a. Molecular weight: 32850.04 Da Isoelectric Point: 8.4593
>NTDB_id=749238 L0P93_RS09215 WP_014417764.1 1764228..1765127(+) (dprA) [Bacillus velezensis strain B19]
MDQASRCLMVCSINQIISPSLLLKWWKADHSLSFLPDPHPLTVLSEGKTAPEAIFREIERKEPELDEVLSDYRRKGITVI
PISSSRYPTWLKAIYDPPAVLYAKGNTLLLEKGRKIGIVGTRKPTEDGIKAAGHLSAELSKKGWVIVSGLASGIDGLSHK
ASIRAKGLTIGVIAGGFHHIYPRENLLLAEYMAEHHLLLSEHPPETKPKKWHFPMRNRIISGLSEGIVVVQGKEKSGSLI
TAYQALDQGREVFAVPGSIFNPYSGGPIKLIQEGAKAVLCAEDIDGELTARCVQYTEPF
MDQASRCLMVCSINQIISPSLLLKWWKADHSLSFLPDPHPLTVLSEGKTAPEAIFREIERKEPELDEVLSDYRRKGITVI
PISSSRYPTWLKAIYDPPAVLYAKGNTLLLEKGRKIGIVGTRKPTEDGIKAAGHLSAELSKKGWVIVSGLASGIDGLSHK
ASIRAKGLTIGVIAGGFHHIYPRENLLLAEYMAEHHLLLSEHPPETKPKKWHFPMRNRIISGLSEGIVVVQGKEKSGSLI
TAYQALDQGREVFAVPGSIFNPYSGGPIKLIQEGAKAVLCAEDIDGELTARCVQYTEPF
Nucleotide
Download Length: 900 bp
>NTDB_id=749238 L0P93_RS09215 WP_014417764.1 1764228..1765127(+) (dprA) [Bacillus velezensis strain B19]
TTGGATCAAGCATCGCGCTGTTTAATGGTCTGCAGTATTAATCAAATCATTTCCCCGTCTCTTCTATTAAAATGGTGGAA
AGCTGACCACTCTCTGTCTTTTTTACCGGATCCGCATCCATTAACTGTTTTATCAGAAGGGAAAACAGCCCCGGAAGCAA
TTTTTCGGGAAATAGAGCGCAAGGAACCGGAACTTGATGAAGTTCTGTCCGATTACCGCCGCAAAGGCATTACTGTCATT
CCGATTTCATCAAGCCGCTATCCAACATGGCTTAAAGCGATTTATGATCCGCCGGCTGTCTTGTATGCAAAAGGGAACAC
GCTGCTTCTTGAAAAAGGCAGAAAAATCGGGATTGTAGGAACGCGGAAACCGACGGAAGACGGAATAAAAGCGGCTGGGC
ATCTTTCCGCCGAACTCTCAAAAAAAGGCTGGGTCATTGTAAGCGGGCTTGCATCCGGTATAGACGGATTGTCTCATAAG
GCGAGCATCAGGGCAAAAGGGCTTACGATCGGCGTGATAGCCGGCGGATTCCATCATATCTATCCCCGGGAAAATCTCCT
GTTAGCAGAATACATGGCTGAACACCATCTCCTACTCTCAGAACATCCTCCTGAAACAAAGCCGAAAAAATGGCACTTTC
CGATGAGAAACCGCATAATCAGCGGACTAAGTGAAGGAATTGTGGTCGTGCAGGGAAAAGAAAAAAGCGGTTCATTAATC
ACAGCTTACCAGGCCCTCGATCAAGGCAGAGAGGTATTTGCCGTTCCGGGTTCCATATTTAATCCATATTCCGGAGGACC
TATAAAACTCATTCAAGAAGGGGCGAAAGCTGTATTATGCGCAGAGGATATTGACGGAGAGCTGACCGCCCGATGCGTTC
AGTATACGGAACCCTTTTGA
TTGGATCAAGCATCGCGCTGTTTAATGGTCTGCAGTATTAATCAAATCATTTCCCCGTCTCTTCTATTAAAATGGTGGAA
AGCTGACCACTCTCTGTCTTTTTTACCGGATCCGCATCCATTAACTGTTTTATCAGAAGGGAAAACAGCCCCGGAAGCAA
TTTTTCGGGAAATAGAGCGCAAGGAACCGGAACTTGATGAAGTTCTGTCCGATTACCGCCGCAAAGGCATTACTGTCATT
CCGATTTCATCAAGCCGCTATCCAACATGGCTTAAAGCGATTTATGATCCGCCGGCTGTCTTGTATGCAAAAGGGAACAC
GCTGCTTCTTGAAAAAGGCAGAAAAATCGGGATTGTAGGAACGCGGAAACCGACGGAAGACGGAATAAAAGCGGCTGGGC
ATCTTTCCGCCGAACTCTCAAAAAAAGGCTGGGTCATTGTAAGCGGGCTTGCATCCGGTATAGACGGATTGTCTCATAAG
GCGAGCATCAGGGCAAAAGGGCTTACGATCGGCGTGATAGCCGGCGGATTCCATCATATCTATCCCCGGGAAAATCTCCT
GTTAGCAGAATACATGGCTGAACACCATCTCCTACTCTCAGAACATCCTCCTGAAACAAAGCCGAAAAAATGGCACTTTC
CGATGAGAAACCGCATAATCAGCGGACTAAGTGAAGGAATTGTGGTCGTGCAGGGAAAAGAAAAAAGCGGTTCATTAATC
ACAGCTTACCAGGCCCTCGATCAAGGCAGAGAGGTATTTGCCGTTCCGGGTTCCATATTTAATCCATATTCCGGAGGACC
TATAAAACTCATTCAAGAAGGGGCGAAAGCTGTATTATGCGCAGAGGATATTGACGGAGAGCTGACCGCCCGATGCGTTC
AGTATACGGAACCCTTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Bacillus subtilis subsp. subtilis str. 168 |
70.569 |
100 |
0.706 |
| dprA | Lactococcus lactis subsp. cremoris KW2 |
41.288 |
88.294 |
0.365 |