Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QAO30_RS12650 Genome accession   NZ_CP123164
Coordinates   2565544..2566344 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain BE-MSSA6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2560544..2571344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO30_RS12630 (QAO30_12625) - 2561119..2561733 (-) 615 WP_253282317.1 hypothetical protein -
  QAO30_RS12635 (QAO30_12630) - 2561769..2562053 (-) 285 WP_411888920.1 dsDNA nuclease domain-containing protein -
  QAO30_RS12640 (QAO30_12635) rlmH 2562152..2562631 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QAO30_RS12645 (QAO30_12640) adsA 2562999..2565317 (-) 2319 WP_000645769.1 LPXTG-anchored adenosine synthase AdsA -
  QAO30_RS12650 (QAO30_12645) vicX 2565544..2566344 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  QAO30_RS12655 (QAO30_12650) - 2566740..2567528 (-) 789 WP_001104166.1 two-component system regulatory protein YycI -
  QAO30_RS12660 (QAO30_12655) yycH 2567529..2568863 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  QAO30_RS12665 (QAO30_12660) walK 2568856..2570682 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=749075 QAO30_RS12650 WP_000088649.1 2565544..2566344(-) (vicX) [Staphylococcus aureus strain BE-MSSA6]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=749075 QAO30_RS12650 WP_000088649.1 2565544..2566344(-) (vicX) [Staphylococcus aureus strain BE-MSSA6]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474