Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   OHU75_RS16300 Genome accession   NZ_CP109761
Coordinates   3044675..3044869 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain P-NA14     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3039675..3049869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU75_RS16275 (OHU75_16275) galT 3039740..3041263 (+) 1524 WP_098248688.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  OHU75_RS16280 (OHU75_16280) - 3041306..3042190 (-) 885 WP_098248687.1 NAD(P)-dependent oxidoreductase -
  OHU75_RS16285 (OHU75_16285) - 3042393..3042581 (-) 189 WP_013055400.1 YjzD family protein -
  OHU75_RS16290 (OHU75_16290) - 3042791..3043531 (+) 741 WP_013081744.1 hypothetical protein -
  OHU75_RS16295 (OHU75_16295) - 3043713..3044597 (+) 885 WP_028407462.1 NAD(P)-dependent oxidoreductase -
  OHU75_RS16300 (OHU75_16300) comZ 3044675..3044869 (+) 195 WP_013081746.1 ComZ family protein Regulator
  OHU75_RS16305 (OHU75_16305) - 3044898..3045098 (-) 201 WP_025749899.1 hypothetical protein -
  OHU75_RS16310 (OHU75_16310) - 3045355..3046293 (+) 939 WP_028407464.1 beta-ketoacyl-ACP synthase III -
  OHU75_RS16315 (OHU75_16315) fabF 3046333..3047574 (+) 1242 WP_049162916.1 beta-ketoacyl-ACP synthase II -
  OHU75_RS16320 (OHU75_16320) - 3047681..3048454 (+) 774 WP_016763040.1 DUF2268 domain-containing protein -
  OHU75_RS16325 (OHU75_16325) - 3048681..3049703 (+) 1023 WP_028407466.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=749067 OHU75_RS16300 WP_013081746.1 3044675..3044869(+) (comZ) [Priestia megaterium strain P-NA14]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=749067 OHU75_RS16300 WP_013081746.1 3044675..3044869(+) (comZ) [Priestia megaterium strain P-NA14]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAACAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGACGCTTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563