Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OHU75_RS03460 Genome accession   NZ_CP109761
Coordinates   639106..640056 (-) Length   316 a.a.
NCBI ID   WP_098778990.1    Uniprot ID   -
Organism   Priestia megaterium strain P-NA14     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 634106..645056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHU75_RS03435 (OHU75_03435) - 634116..634970 (-) 855 WP_013057886.1 manganese catalase family protein -
  OHU75_RS03440 (OHU75_03440) - 635161..636003 (-) 843 WP_034650592.1 manganese catalase family protein -
  OHU75_RS03445 (OHU75_03445) - 636434..637390 (-) 957 WP_098778994.1 siderophore ABC transporter substrate-binding protein -
  OHU75_RS03450 (OHU75_03450) - 637414..638172 (-) 759 WP_098778992.1 ABC transporter ATP-binding protein -
  OHU75_RS03455 (OHU75_03455) - 638166..639113 (-) 948 WP_016764832.1 iron chelate uptake ABC transporter family permease subunit -
  OHU75_RS03460 (OHU75_03460) ceuB 639106..640056 (-) 951 WP_098778990.1 ABC transporter permease Machinery gene
  OHU75_RS03465 (OHU75_03465) - 640461..641267 (-) 807 WP_264388133.1 cell wall hydrolase -
  OHU75_RS03470 (OHU75_03470) - 641630..641884 (+) 255 WP_013057893.1 hypothetical protein -
  OHU75_RS03475 (OHU75_03475) - 641966..642130 (-) 165 WP_013057894.1 hypothetical protein -
  OHU75_RS03480 (OHU75_03480) - 642456..643019 (-) 564 WP_098778986.1 NAD(P)H-dependent oxidoreductase -
  OHU75_RS03485 (OHU75_03485) lepB 643311..643871 (-) 561 WP_025751067.1 signal peptidase I -
  OHU75_RS03490 (OHU75_03490) - 643955..644317 (-) 363 WP_255293361.1 DUF4440 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=749030 OHU75_RS03460 WP_098778990.1 639106..640056(-) (ceuB) [Priestia megaterium strain P-NA14]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSLNLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=749030 OHU75_RS03460 WP_098778990.1 639106..640056(-) (ceuB) [Priestia megaterium strain P-NA14]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTTATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAATGATACGATTT
ATATTCCGCTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTAGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGTAGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATCGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCACTCAATTTAGGTG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTGTCGCTTATTACGTCAATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATTCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTGGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGCTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.649

95.57

0.503