Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QAY77_RS03690 Genome accession   NZ_CP123162
Coordinates   758107..759078 (+) Length   323 a.a.
NCBI ID   WP_411888759.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BE-MSSA7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 753107..764078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY77_RS03670 (QAY77_03665) nrdI 753844..754242 (+) 399 WP_000692521.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
  QAY77_RS03675 (QAY77_03670) nrdE 754205..756310 (+) 2106 WP_000855505.1 class 1b ribonucleoside-diphosphate reductase subunit alpha -
  QAY77_RS03680 (QAY77_03675) nrdF 756428..757399 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  QAY77_RS03685 (QAY77_03680) - 757913..758068 (+) 156 WP_000499195.1 hypothetical protein -
  QAY77_RS03690 (QAY77_03685) ceuB 758107..759078 (+) 972 WP_411888759.1 ABC transporter permease Machinery gene
  QAY77_RS03695 (QAY77_03690) - 759065..760021 (+) 957 WP_001245578.1 iron chelate uptake ABC transporter family permease subunit -
  QAY77_RS03700 (QAY77_03695) - 760018..760779 (+) 762 WP_000616842.1 ABC transporter ATP-binding protein -
  QAY77_RS03705 (QAY77_03700) - 760898..761926 (+) 1029 WP_000754443.1 ferrated catecholamine ABC transporter substrate-binding lipoprotein SstD -
  QAY77_RS03710 (QAY77_03705) - 762243..762557 (-) 315 WP_001127269.1 CHY zinc finger protein -
  QAY77_RS03715 (QAY77_03710) murB 762575..763498 (-) 924 WP_000608440.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35598.12 Da        Isoelectric Point: 10.1194

>NTDB_id=748917 QAY77_RS03690 WP_411888759.1 758107..759078(+) (ceuB) [Staphylococcus aureus strain BE-MSSA7]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFSVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=748917 QAY77_RS03690 WP_411888759.1 758107..759078(+) (ceuB) [Staphylococcus aureus strain BE-MSSA7]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAGTCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTTCTGTTATTTGCAGTATTTGCGGTACGTTTTTATTTGTTAAAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTACCGCTTTTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACAACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGACTAGTAATACCAAATATTATTTCAATTTATCGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.188

99.071

0.467