Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   N8A73_RS08635 Genome accession   NZ_CP109651
Coordinates   1704759..1705139 (+) Length   126 a.a.
NCBI ID   WP_044335941.1    Uniprot ID   A0AAP7UKB4
Organism   Bacillus safensis strain LG01     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1699759..1710139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A73_RS08625 - 1700254..1703397 (+) 3144 WP_254001702.1 bifunctional cytochrome P450/NADPH--P450 reductase -
  N8A73_RS08630 - 1703591..1704499 (+) 909 WP_024425124.1 serine protease -
  N8A73_RS08635 nucA/comI 1704759..1705139 (+) 381 WP_044335941.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  N8A73_RS08640 - 1705285..1706133 (+) 849 WP_061109911.1 STAS domain-containing protein -
  N8A73_RS08645 - 1706167..1706709 (-) 543 WP_254001703.1 IseA DL-endopeptidase inhibitor family protein -
  N8A73_RS08650 - 1707006..1707449 (+) 444 WP_046311203.1 hypothetical protein -
  N8A73_RS08655 lexA 1707495..1708115 (-) 621 WP_034283422.1 transcriptional repressor LexA -
  N8A73_RS08660 yneA 1708274..1708585 (+) 312 WP_024425130.1 cell division suppressor protein YneA -
  N8A73_RS08665 - 1708603..1709250 (+) 648 WP_034283427.1 recombinase family protein -
  N8A73_RS08670 - 1709320..1709550 (+) 231 WP_024425132.1 DUF896 domain-containing protein -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 13727.41 Da        Isoelectric Point: 8.5068

>NTDB_id=748742 N8A73_RS08635 WP_044335941.1 1704759..1705139(+) (nucA/comI) [Bacillus safensis strain LG01]
MGTLLGGFGEKQAAKGADRYDHVVQFPKERYPETGSHIQEAIRKGHSDVCTIDRNGADARRQESLKGIPTKPGFDRDEWP
MAVCLEGGKGASVQYVSPSDNRGAGSWVGHQISGFPDGKRILFIVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=748742 N8A73_RS08635 WP_044335941.1 1704759..1705139(+) (nucA/comI) [Bacillus safensis strain LG01]
ATGGGCACGTTGTTAGGTGGATTTGGAGAGAAGCAGGCAGCAAAAGGGGCTGATCGATATGATCATGTCGTTCAATTTCC
AAAGGAAAGGTACCCTGAAACAGGCAGTCATATTCAAGAAGCCATTCGAAAAGGGCATTCAGATGTGTGTACCATTGACC
GAAATGGAGCAGATGCCCGCAGGCAAGAATCATTAAAAGGAATTCCGACAAAACCTGGCTTTGACCGGGATGAATGGCCA
ATGGCGGTTTGTCTTGAGGGAGGAAAAGGCGCAAGCGTACAATATGTTAGTCCATCTGATAATAGGGGAGCAGGCTCATG
GGTCGGGCACCAAATCAGCGGGTTTCCTGATGGGAAAAGAATATTATTCATTGTGAAATAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(29-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

57.983

94.444

0.548