Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   QAO39_RS04600 Genome accession   NZ_CP123158
Coordinates   883815..885089 (-) Length   424 a.a.
NCBI ID   WP_165468770.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BE-MSSA9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 878815..890089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO39_RS04585 (QAO39_04585) - 881100..881192 (+) 93 WP_031761401.1 hypothetical protein -
  QAO39_RS04590 (QAO39_04590) - 881172..882077 (-) 906 WP_000184370.1 transglycosylase domain-containing protein -
  QAO39_RS04595 (QAO39_04595) tyrS 882459..883721 (+) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  QAO39_RS04600 (QAO39_04600) htrA 883815..885089 (-) 1275 WP_165468770.1 S1C family serine protease Regulator
  QAO39_RS04605 (QAO39_04605) - 885261..885878 (+) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  QAO39_RS04610 (QAO39_04610) nagE 886006..887472 (+) 1467 WP_000276367.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  QAO39_RS04615 (QAO39_04615) - 887579..888709 (+) 1131 WP_072496642.1 HAD family hydrolase -
  QAO39_RS04620 (QAO39_04620) - 888670..888765 (-) 96 WP_031761395.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45872.09 Da        Isoelectric Point: 10.0361

>NTDB_id=748741 QAO39_RS04600 WP_165468770.1 883815..885089(-) (htrA) [Staphylococcus aureus strain BE-MSSA9]
MSDFNHTDHSTTNHRQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=748741 QAO39_RS04600 WP_165468770.1 883815..885089(-) (htrA) [Staphylococcus aureus strain BE-MSSA9]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGGCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

39.055

94.811

0.37