Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   N8A73_RS05490 Genome accession   NZ_CP109651
Coordinates   1091137..1092099 (+) Length   320 a.a.
NCBI ID   WP_176967568.1    Uniprot ID   -
Organism   Bacillus safensis strain LG01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1086137..1097099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A73_RS05460 argF 1086475..1087425 (+) 951 WP_041110110.1 ornithine carbamoyltransferase -
  N8A73_RS05465 - 1087528..1087707 (+) 180 WP_008348517.1 YjzC family protein -
  N8A73_RS05470 - 1087871..1089136 (+) 1266 WP_034621775.1 MFS transporter -
  N8A73_RS05475 - 1089249..1089443 (-) 195 WP_003211779.1 YjzD family protein -
  N8A73_RS05480 - 1089656..1090396 (+) 741 WP_176967526.1 hypothetical protein -
  N8A73_RS05485 - 1090470..1091045 (+) 576 WP_176967525.1 nad binding enzyme -
  N8A73_RS05490 med 1091137..1092099 (+) 963 WP_176967568.1 BMP family ABC transporter substrate-binding protein Regulator
  N8A73_RS05495 comZ 1092112..1092309 (+) 198 WP_024425054.1 ComZ family protein Regulator
  N8A73_RS05500 - 1092320..1092553 (-) 234 WP_024426489.1 hypothetical protein -
  N8A73_RS05505 - 1092725..1093663 (+) 939 WP_024425052.1 beta-ketoacyl-ACP synthase III -
  N8A73_RS05510 fabF 1093685..1094926 (+) 1242 WP_024425051.1 beta-ketoacyl-ACP synthase II -
  N8A73_RS05515 - 1095004..1095804 (+) 801 WP_264316079.1 DUF2268 domain-containing protein -
  N8A73_RS05520 - 1095957..1096937 (+) 981 WP_034282076.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 320 a.a.        Molecular weight: 35655.48 Da        Isoelectric Point: 5.0003

>NTDB_id=748727 N8A73_RS05490 WP_176967568.1 1091137..1092099(+) (med) [Bacillus safensis strain LG01]
MKYQRLVMIFSFLLLLSSCSQAPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLSIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPNIQFITVNGNKPQAGNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQDEYSFDFKEGVVEMGKFSSTIDDAFVKDIESDIASYKKTGKLPNEK

Nucleotide


Download         Length: 963 bp        

>NTDB_id=748727 N8A73_RS05490 WP_176967568.1 1091137..1092099(+) (med) [Bacillus safensis strain LG01]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTATTATCTTCCTGCTCGCAGGCGCCTTTAAAAGGAAA
AATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATCAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
GTATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAGGAGAAAATCGTTGATGCCATTGAA
GAATTCCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGTGAAATTTTTAACTTGATCAGTGAAGA
TTATCCAAACATACAATTTATTACTGTCAATGGAAACAAGCCTCAGGCGGGCAATGTCACAAACGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCTGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGTGAAGTAGACGGCTTTATCAAAGGAGCAAAATATCAAGATGAACATGTACAAGTATTAGCAGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCGGTGGAGCTCTATCAAAAATTAAAAAAGCAGGGCGTTGATGTTGTGTATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATACGTCACCGATCAATCC
AACCTCGGCAGCCATACAGTTTTAACGAGCACTGTACAGCATGTTGATAAAGCGTACAGTATCATTGCAAAGAAGTTTAA
TGAAGGCAAGCTAAATGAACAAGATGAGTACTCCTTTGATTTTAAAGAAGGAGTGGTCGAGATGGGGAAATTTAGTTCCA
CCATTGACGACGCTTTTGTGAAAGACATTGAAAGTGATATTGCGTCATACAAAAAAACAGGTAAACTGCCTAATGAAAAG
TGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.537

97.813

0.631