Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QAO56_RS03390 Genome accession   NZ_CP123156
Coordinates   711399..712073 (+) Length   224 a.a.
NCBI ID   WP_001166504.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GE-MRSA16     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 706399..717073
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO56_RS03365 (QAO56_03350) - 706612..707679 (+) 1068 WP_000980142.1 membrane protein -
  QAO56_RS03370 (QAO56_03355) - 707830..708873 (+) 1044 WP_001030756.1 alpha/beta hydrolase -
  QAO56_RS03375 (QAO56_03360) - 709202..709630 (+) 429 WP_000198504.1 hypothetical protein -
  QAO56_RS03380 (QAO56_03365) - 709841..710347 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QAO56_RS03385 (QAO56_03370) graX 710460..711383 (+) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  QAO56_RS03390 (QAO56_03375) braR 711399..712073 (+) 675 WP_001166504.1 response regulator transcription factor GraR/ApsR Regulator
  QAO56_RS03395 (QAO56_03380) graS 712066..713106 (+) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  QAO56_RS03400 (QAO56_03385) vraF 713253..714014 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  QAO56_RS03405 (QAO56_03390) - 714004..715893 (+) 1890 WP_000009403.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26034.86 Da        Isoelectric Point: 4.3968

>NTDB_id=748645 QAO56_RS03390 WP_001166504.1 711399..712073(+) (braR) [Staphylococcus aureus strain GE-MRSA16]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAVETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=748645 QAO56_RS03390 WP_001166504.1 711399..712073(+) (braR) [Staphylococcus aureus strain GE-MRSA16]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGCCGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAGTTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402