Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   QAO56_RS00120 Genome accession   NZ_CP123156
Coordinates   29438..30238 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain GE-MRSA16     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24438..35238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO56_RS00105 (QAO56_00105) walK 25108..26934 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  QAO56_RS00110 (QAO56_00110) yycH 26927..28261 (+) 1335 WP_001060151.1 two-component system activity regulator YycH -
  QAO56_RS00115 (QAO56_00115) - 28262..29050 (+) 789 WP_001104170.1 two-component system regulatory protein YycI -
  QAO56_RS00120 (QAO56_00120) vicX 29438..30238 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  QAO56_RS00125 (QAO56_00125) adsA 30466..32766 (+) 2301 WP_000645776.1 LPXTG-anchored adenosine synthase AdsA -
  QAO56_RS00130 (QAO56_00130) rlmH 33134..33613 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QAO56_RS00135 (QAO56_00135) - 33859..34164 (+) 306 WP_000677988.1 hypothetical protein -
  QAO56_RS00140 (QAO56_00140) - 34363..35226 (+) 864 WP_000680580.1 LEM-3-like GIY-YIG domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=748636 QAO56_RS00120 WP_000088649.1 29438..30238(+) (vicX) [Staphylococcus aureus strain GE-MRSA16]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=748636 QAO56_RS00120 WP_000088649.1 29438..30238(+) (vicX) [Staphylococcus aureus strain GE-MRSA16]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCATTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGCATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACACCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474