Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   OGM83_RS09310 Genome accession   NZ_CP109611
Coordinates   1947371..1949044 (-) Length   557 a.a.
NCBI ID   WP_002397924.1    Uniprot ID   A0A449FZN5
Organism   Enterococcus faecalis strain AFL-109F     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1942371..1954044
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OGM83_RS09280 (OGM83_09280) ftsL 1943386..1943793 (-) 408 WP_002358883.1 cell division protein FtsL -
  OGM83_RS09285 (OGM83_09285) rsmH 1943810..1944766 (-) 957 WP_010774092.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  OGM83_RS09290 (OGM83_09290) mraZ 1944781..1945266 (-) 486 WP_002383402.1 division/cell wall cluster transcriptional repressor MraZ -
  OGM83_RS09295 (OGM83_09295) - 1945500..1945892 (-) 393 WP_002383401.1 DUF3397 domain-containing protein -
  OGM83_RS09300 (OGM83_09300) - 1946137..1947102 (+) 966 WP_002383400.1 magnesium transporter CorA family protein -
  OGM83_RS09305 (OGM83_09305) - 1947170..1947280 (+) 111 WP_002383399.1 DUF4044 domain-containing protein -
  OGM83_RS09310 (OGM83_09310) recN 1947371..1949044 (-) 1674 WP_002397924.1 DNA repair protein RecN Machinery gene
  OGM83_RS09315 (OGM83_09315) - 1949062..1949511 (-) 450 WP_002355883.1 ArgR family transcriptional regulator -
  OGM83_RS09320 (OGM83_09320) - 1949643..1950503 (-) 861 WP_010706683.1 hypothetical protein -
  OGM83_RS09325 (OGM83_09325) - 1950508..1951065 (-) 558 WP_071646615.1 matrixin family metalloprotease -
  OGM83_RS09330 (OGM83_09330) - 1951429..1952244 (-) 816 WP_002364633.1 TlyA family rRNA (cytidine-2'-O)-methyltransferase -
  OGM83_RS09335 (OGM83_09335) - 1952258..1953139 (-) 882 WP_010828662.1 polyprenyl synthetase family protein -
  OGM83_RS09340 (OGM83_09340) - 1953139..1953369 (-) 231 WP_002355878.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 557 a.a.        Molecular weight: 62631.00 Da        Isoelectric Point: 4.5521

>NTDB_id=748506 OGM83_RS09310 WP_002397924.1 1947371..1949044(-) (recN) [Enterococcus faecalis strain AFL-109F]
MLQELSVKNFAIISSLQLEFQMGMTVLTGETGAGKSIIIDAMGLLTGGRGSSDYIRQGANKCTLEGLFSMPKSQELKQLL
EELGIETEEDSLVIQRDISASGKNVCRVNGRIVNITNLKRIGEYLVDIHGQNEHQELMQSERHIDMLDEFGGKKLLAVKE
KYTQAYQEYRALEAKVRKRQKNEKEFAQRMDMLHFQSDEIASAQLVAGEEEQLLEERNKLNNFQKIADALTISYAALNGE
DDSSLDKIGTSMNELASIESLDSEYKTLSDTVQNAYYLLQEASGDLSRLIDGLELDEGRLNEVENRLELIRQMKRKYGDS
IETILSYYEEITKELAEADFLEGGTGDLEALLAEKQQAAHQQALALRKERKRLAKELEQQILTELKELYLERTEFEVRFT
ELEHLQENGLDGVEFYITTNPGEPLKPLVRVASGGELSRVMLAMKTIFSQTQGITSIVFDEVDTGVSGRVAQAIADKIYQ
ISENSQVLCITHLPQVAAVADEHYFIEKEIVAGRTETSVRILSEKERVNEIARMLAGSEITKLTIEHAQELLAMAKK

Nucleotide


Download         Length: 1674 bp        

>NTDB_id=748506 OGM83_RS09310 WP_002397924.1 1947371..1949044(-) (recN) [Enterococcus faecalis strain AFL-109F]
ATGTTACAAGAACTTTCCGTGAAAAATTTTGCGATTATCTCTTCGTTACAATTAGAGTTTCAAATGGGTATGACCGTTTT
AACGGGAGAAACGGGTGCGGGGAAATCCATCATTATTGATGCAATGGGATTACTCACAGGCGGACGCGGCTCCAGTGACT
ATATTCGTCAAGGAGCAAATAAATGCACCTTAGAAGGACTTTTTTCAATGCCGAAAAGTCAAGAATTAAAGCAATTATTA
GAAGAATTAGGTATTGAAACAGAAGAAGATTCTTTAGTGATTCAACGAGATATTTCCGCTTCTGGTAAAAATGTTTGCCG
TGTCAACGGACGAATTGTCAACATTACTAATTTAAAAAGAATTGGGGAATATTTAGTAGATATTCATGGCCAAAACGAAC
ATCAAGAATTGATGCAAAGTGAACGCCATATTGATATGTTGGATGAATTTGGTGGGAAAAAACTTTTAGCAGTCAAAGAA
AAATATACACAGGCGTATCAAGAGTATCGCGCACTCGAAGCCAAAGTCAGAAAGCGACAAAAAAATGAAAAAGAGTTTGC
CCAAAGAATGGACATGCTTCATTTTCAAAGTGATGAAATTGCTAGTGCACAGTTAGTGGCTGGCGAAGAAGAACAATTGC
TAGAAGAACGCAATAAACTGAACAATTTTCAAAAGATTGCTGATGCACTGACGATTAGTTATGCCGCGCTAAATGGTGAA
GACGATAGTAGTTTGGATAAAATCGGAACAAGTATGAATGAACTCGCTTCGATTGAATCCCTTGATTCAGAATATAAAAC
ATTGTCAGATACTGTTCAAAATGCTTACTACTTACTACAAGAAGCCAGTGGAGATCTTTCTAGGTTGATTGATGGCTTAG
AACTAGACGAAGGCCGCTTGAATGAAGTAGAAAATCGTTTGGAATTAATCCGTCAAATGAAACGTAAATATGGCGATTCA
ATCGAAACGATTTTATCTTACTATGAAGAAATCACCAAAGAGTTAGCAGAGGCTGATTTTTTGGAAGGTGGTACAGGTGA
CTTAGAAGCGTTGCTTGCAGAGAAACAACAAGCCGCTCATCAACAAGCATTAGCTTTACGAAAAGAACGAAAGCGCCTAG
CCAAAGAGCTCGAACAACAAATTTTAACCGAATTAAAAGAACTATATTTGGAGCGAACGGAATTTGAAGTCCGTTTTACA
GAACTTGAGCATTTACAAGAAAATGGCTTAGACGGAGTAGAATTTTATATTACTACTAACCCAGGGGAACCATTAAAACC
GTTAGTTCGGGTGGCTTCTGGCGGAGAACTTTCGCGAGTGATGCTAGCTATGAAAACAATCTTTTCTCAAACGCAAGGGA
TCACTAGTATTGTTTTTGATGAAGTGGATACAGGAGTTAGTGGCCGAGTAGCACAGGCGATTGCCGATAAAATTTATCAA
ATTTCAGAAAATTCGCAGGTGTTGTGTATCACGCACTTGCCACAAGTGGCGGCCGTTGCCGATGAACATTATTTTATTGA
AAAAGAAATCGTGGCGGGTCGGACAGAAACAAGCGTCCGAATTTTATCTGAAAAAGAGCGAGTAAACGAAATTGCGCGTA
TGCTCGCAGGAAGTGAAATTACGAAATTAACCATTGAACATGCACAAGAGCTGTTGGCGATGGCGAAAAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A449FZN5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

48.691

100

0.501