Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KP2022_RS16290 Genome accession   NZ_CP109604
Coordinates   3291094..3291690 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KP2022     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3286094..3296690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KP2022_RS16275 (KP2022_16280) helD 3286302..3288356 (-) 2055 WP_004179218.1 DNA helicase IV -
  KP2022_RS16280 (KP2022_16285) - 3288481..3288927 (+) 447 WP_021312905.1 YccF domain-containing protein -
  KP2022_RS16285 (KP2022_16290) yccS 3288945..3291080 (+) 2136 WP_002898422.1 YccS family putative transporter -
  KP2022_RS16290 (KP2022_16295) sxy/tfoX 3291094..3291690 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  KP2022_RS16295 (KP2022_16300) sulA 3292039..3292548 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  KP2022_RS16300 (KP2022_16305) ompA 3292901..3293971 (+) 1071 WP_002898408.1 porin OmpA -
  KP2022_RS16305 (KP2022_16310) matP 3294103..3294555 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KP2022_RS16310 (KP2022_16315) - 3294741..3296498 (+) 1758 WP_004147851.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=748418 KP2022_RS16290 WP_004179217.1 3291094..3291690(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP2022]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=748418 KP2022_RS16290 WP_004179217.1 3291094..3291690(-) (sxy/tfoX) [Klebsiella pneumoniae strain KP2022]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTAGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51