Detailed information NTG0074803

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FJMB_RS23380
• Genome accession: NZ_AP024687
• Coordinates: 4866088..4867113 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain FUJ80154
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4861088..4872113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FJMB_RS23370 (FJMB80154_44790)	rpmE	4863319..4863531 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
FJMB_RS23375 (FJMB80154_44800)	priA	4863734..4865932 (+)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
FJMB_RS23380 (FJMB80154_44810)	cytR	4866088..4867113 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
FJMB_RS23385 (FJMB80154_44820)	ftsN	4867205..4868164 (+)	960	WP_000068834.1	cell division protein FtsN	-
FJMB_RS23390 (FJMB80154_44830)	hslV	4868257..4868787 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
FJMB_RS23395 (FJMB80154_44840)	hslU	4868797..4870128 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
FJMB_RS23400 (FJMB80154_44850)	menA	4870195..4871121 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FJMB_RS23405 (FJMB80154_44860)	rraA	4871214..4871699 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
FJMB_RS23410 (FJMB80154_44870)	zapB	4871784..4872029 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=74803 FJMB_RS23380 WP_000644904.1 4866088..4867113(+) (cytR) [Escherichia coli strain FUJ80154]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=74803 FJMB_RS23380 WP_000644904.1 4866088..4867113(+) (cytR) [Escherichia coli strain FUJ80154]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628