Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   QAY78_RS01380 Genome accession   NZ_CP123128
Coordinates   242538..243812 (-) Length   424 a.a.
NCBI ID   WP_411896737.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GE-MSSA31     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 237538..248812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY78_RS01365 (QAY78_01360) - 239830..239916 (+) 87 WP_031785424.1 hypothetical protein -
  QAY78_RS01370 (QAY78_01365) - 239896..240801 (-) 906 WP_000184363.1 transglycosylase domain-containing protein -
  QAY78_RS01375 (QAY78_01370) tyrS 241182..242444 (+) 1263 WP_000186035.1 tyrosine--tRNA ligase -
  QAY78_RS01380 (QAY78_01375) htrA 242538..243812 (-) 1275 WP_411896737.1 S1C family serine protease Regulator
  QAY78_RS01385 (QAY78_01380) - 243984..244601 (+) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  QAY78_RS01390 (QAY78_01385) nagE 244729..246195 (+) 1467 WP_000276359.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  QAY78_RS01395 (QAY78_01390) - 246302..247432 (+) 1131 WP_000721726.1 HAD family hydrolase -
  QAY78_RS01400 (QAY78_01395) - 247393..247479 (-) 87 WP_153908661.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45837.00 Da        Isoelectric Point: 9.9696

>NTDB_id=747667 QAY78_RS01380 WP_411896737.1 242538..243812(-) (htrA) [Staphylococcus aureus strain GE-MSSA31]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVFQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=747667 QAY78_RS01380 WP_411896737.1 242538..243812(-) (htrA) [Staphylococcus aureus strain GE-MSSA31]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTCCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAATCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGACGCAGAGACAACTGGAGGTAATACAAAA
GTCAGCGTTTTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATTGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATAGACCGCCCTTCAATCGGTATTGGATTAATTAATTTGAAAGATATCCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAGCCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGCCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368