Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QAY78_RS00855 Genome accession   NZ_CP123128
Coordinates   138116..138856 (+) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GE-MSSA31     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 133116..143856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY78_RS00830 (QAY78_00825) yhaM 133535..134476 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  QAY78_RS00835 (QAY78_00830) - 134597..135559 (-) 963 WP_000782119.1 foldase protein PrsA -
  QAY78_RS00840 (QAY78_00835) - 135764..136321 (-) 558 WP_000477957.1 DUF3267 domain-containing protein -
  QAY78_RS00845 (QAY78_00840) - 137053..137418 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  QAY78_RS00850 (QAY78_00845) - 137560..137982 (-) 423 WP_000004985.1 HIT family protein -
  QAY78_RS00855 (QAY78_00850) pptA 138116..138856 (+) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  QAY78_RS00860 (QAY78_00855) ecsB 138849..140072 (+) 1224 WP_001245753.1 ABC transporter permease EcsB -
  QAY78_RS00865 (QAY78_00860) traP 140197..140700 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  QAY78_RS00870 (QAY78_00865) - 140886..140972 (+) 87 WP_031875110.1 hypothetical protein -
  QAY78_RS00875 (QAY78_00870) hemE 140962..141999 (+) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  QAY78_RS00880 (QAY78_00875) hemH 142056..142979 (+) 924 WP_000162875.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=747665 QAY78_RS00855 WP_000216874.1 138116..138856(+) (pptA) [Staphylococcus aureus strain GE-MSSA31]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=747665 QAY78_RS00855 WP_000216874.1 138116..138856(+) (pptA) [Staphylococcus aureus strain GE-MSSA31]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTAAATGGTGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATATACGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTTCTTGGCTTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545