Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QAO33_RS12495 Genome accession   NZ_CP123123
Coordinates   2586901..2587641 (-) Length   246 a.a.
NCBI ID   WP_000216874.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GE-MSSA33     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2581901..2592641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO33_RS12470 (QAO33_12465) hemH 2582777..2583700 (-) 924 WP_000162881.1 ferrochelatase -
  QAO33_RS12475 (QAO33_12470) hemE 2583758..2584795 (-) 1038 WP_000233526.1 uroporphyrinogen decarboxylase -
  QAO33_RS12480 (QAO33_12475) - 2584785..2584895 (-) 111 WP_001790154.1 hypothetical protein -
  QAO33_RS12485 (QAO33_12480) traP 2585058..2585561 (+) 504 WP_000737978.1 signal transduction protein TRAP -
  QAO33_RS12490 (QAO33_12485) ecsB 2585685..2586908 (-) 1224 WP_000551840.1 ABC transporter permease EcsB -
  QAO33_RS12495 (QAO33_12490) pptA 2586901..2587641 (-) 741 WP_000216874.1 ABC transporter ATP-binding protein EcsA Regulator
  QAO33_RS12500 (QAO33_12495) - 2587775..2588197 (+) 423 WP_000004981.1 HIT family protein -
  QAO33_RS12505 (QAO33_12500) - 2588339..2588704 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  QAO33_RS12510 (QAO33_12505) - 2589437..2589994 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  QAO33_RS12515 (QAO33_12510) - 2590199..2591161 (+) 963 WP_000782121.1 foldase protein PrsA -
  QAO33_RS12520 (QAO33_12515) yhaM 2591282..2592223 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.02 Da        Isoelectric Point: 4.6672

>NTDB_id=747564 QAO33_RS12495 WP_000216874.1 2586901..2587641(-) (pptA) [Staphylococcus aureus strain GE-MSSA33]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=747564 QAO33_RS12495 WP_000216874.1 2586901..2587641(-) (pptA) [Staphylococcus aureus strain GE-MSSA33]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATTGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGCCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTACTGTGATCGTTTTATCATACTTGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.322

97.154

0.557
  pptA Streptococcus thermophilus LMD-9

56.067

97.154

0.545