Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   QAO20_RS13440 Genome accession   NZ_CP123106
Coordinates   2678561..2679835 (-) Length   424 a.a.
NCBI ID   WP_001279341.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT-MSSA50     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2673561..2684835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO20_RS13425 (QAO20_13395) - 2675847..2675939 (+) 93 WP_031761401.1 hypothetical protein -
  QAO20_RS13430 (QAO20_13400) - 2675919..2676824 (-) 906 WP_000184375.1 transglycosylase domain-containing protein -
  QAO20_RS13435 (QAO20_13405) tyrS 2677205..2678467 (+) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  QAO20_RS13440 (QAO20_13410) htrA 2678561..2679835 (-) 1275 WP_001279341.1 S1C family serine protease Regulator
  QAO20_RS13445 (QAO20_13415) - 2680007..2680624 (+) 618 WP_000287588.1 lysophospholipid acyltransferase family protein -
  QAO20_RS13450 (QAO20_13420) nagE 2680752..2682218 (+) 1467 WP_000276354.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  QAO20_RS13455 (QAO20_13425) - 2682324..2683454 (+) 1131 WP_000721723.1 HAD family hydrolase -
  QAO20_RS13460 (QAO20_13430) - 2683415..2683510 (-) 96 WP_042899978.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45733.87 Da        Isoelectric Point: 9.8964

>NTDB_id=746945 QAO20_RS13440 WP_001279341.1 2678561..2679835(-) (htrA) [Staphylococcus aureus strain IT-MSSA50]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=746945 QAO20_RS13440 WP_001279341.1 2678561..2679835(-) (htrA) [Staphylococcus aureus strain IT-MSSA50]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTCCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGTAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGTGTAGGTTCAGGTGTCATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAGGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAGGTACAAACTGGTGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAGCCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACTAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368