Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QAO20_RS12775 Genome accession   NZ_CP123106
Coordinates   2548107..2548847 (+) Length   246 a.a.
NCBI ID   WP_000216876.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT-MSSA50     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2543107..2553847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO20_RS12750 (QAO20_12715) yhaM 2543525..2544466 (+) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -
  QAO20_RS12755 (QAO20_12720) - 2544587..2545549 (-) 963 WP_111065313.1 foldase protein PrsA -
  QAO20_RS12760 (QAO20_12725) - 2545754..2546311 (-) 558 WP_000477959.1 DUF3267 domain-containing protein -
  QAO20_RS12765 (QAO20_12730) - 2547044..2547409 (-) 366 WP_000648118.1 YtxH domain-containing protein -
  QAO20_RS12770 (QAO20_12735) - 2547551..2547973 (-) 423 WP_000004981.1 HIT family protein -
  QAO20_RS12775 (QAO20_12740) pptA 2548107..2548847 (+) 741 WP_000216876.1 ABC transporter ATP-binding protein EcsA Regulator
  QAO20_RS12780 (QAO20_12745) ecsB 2548840..2550063 (+) 1224 WP_001245755.1 ABC transporter permease EcsB -
  QAO20_RS12785 (QAO20_12750) traP 2550187..2550690 (-) 504 WP_000737983.1 signal transduction protein TRAP -
  QAO20_RS12790 (QAO20_12755) - 2550876..2550962 (+) 87 WP_031875110.1 hypothetical protein -
  QAO20_RS12795 (QAO20_12760) hemE 2550952..2551989 (+) 1038 WP_000233539.1 uroporphyrinogen decarboxylase -
  QAO20_RS12800 (QAO20_12765) hemH 2552047..2552970 (+) 924 WP_000162884.1 ferrochelatase -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27745.05 Da        Isoelectric Point: 4.6125

>NTDB_id=746943 QAO20_RS12775 WP_000216876.1 2548107..2548847(+) (pptA) [Staphylococcus aureus strain IT-MSSA50]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEELRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=746943 QAO20_RS12775 WP_000216876.1 2548107..2548847(+) (pptA) [Staphylococcus aureus strain IT-MSSA50]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGTCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAATTTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGATATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGGGATTTAGAAGAATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

57.741

97.154

0.561
  pptA Streptococcus thermophilus LMD-9

56.485

97.154

0.549