Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QAO20_RS12430 Genome accession   NZ_CP123106
Coordinates   2501512..2502330 (+) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain IT-MSSA50     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2496512..2507330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO20_RS12405 (QAO20_12370) - 2497131..2497661 (+) 531 WP_000184381.1 acyl-CoA thioesterase -
  QAO20_RS12410 (QAO20_12375) yfkAB 2497921..2499072 (-) 1152 WP_043054751.1 radical SAM/CxCxxxxC motif protein YfkAB -
  QAO20_RS12415 (QAO20_12380) - 2499296..2499457 (+) 162 WP_001005407.1 SE1561 family protein -
  QAO20_RS12420 (QAO20_12385) - 2499587..2500102 (+) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  QAO20_RS12425 (QAO20_12390) sgtB 2500442..2501251 (+) 810 WP_111065335.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  QAO20_RS12430 (QAO20_12395) recX 2501512..2502330 (+) 819 WP_001124422.1 recombination regulator RecX Regulator
  QAO20_RS12435 (QAO20_12400) - 2502308..2502622 (+) 315 WP_000435806.1 YfhH family protein -
  QAO20_RS12440 (QAO20_12405) - 2502637..2504154 (+) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  QAO20_RS12445 (QAO20_12410) - 2504163..2504999 (+) 837 WP_000886455.1 membrane protein -
  QAO20_RS12450 (QAO20_12415) - 2505260..2506237 (-) 978 WP_000379094.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=746941 QAO20_RS12430 WP_001124422.1 2501512..2502330(+) (recX) [Staphylococcus aureus strain IT-MSSA50]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=746941 QAO20_RS12430 WP_001124422.1 2501512..2502330(+) (recX) [Staphylococcus aureus strain IT-MSSA50]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAGCAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACAATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996