Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   QAO20_RS11675 Genome accession   NZ_CP123106
Coordinates   2385671..2386384 (-) Length   237 a.a.
NCBI ID   WP_001031454.1    Uniprot ID   A0A0H2XG68
Organism   Staphylococcus aureus strain IT-MSSA50     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2380671..2391384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO20_RS11650 (QAO20_11620) - 2381536..2382573 (-) 1038 WP_111065291.1 tyrosine-type recombinase/integrase -
  QAO20_RS11655 (QAO20_11625) - 2382634..2383725 (-) 1092 WP_000440028.1 Abi family protein -
  QAO20_RS11660 (QAO20_11630) - 2384005..2384172 (-) 168 WP_000705238.1 hypothetical protein -
  QAO20_RS11665 (QAO20_11635) - 2384376..2384717 (-) 342 WP_000591749.1 hypothetical protein -
  QAO20_RS11670 (QAO20_11640) - 2384723..2385655 (-) 933 WP_111065292.1 exonuclease domain-containing protein -
  QAO20_RS11675 (QAO20_11645) irvR 2385671..2386384 (-) 714 WP_001031454.1 XRE family transcriptional regulator Regulator
  QAO20_RS11680 (QAO20_11650) - 2386347..2386520 (+) 174 WP_001801500.1 hypothetical protein -
  QAO20_RS11685 (QAO20_11655) - 2386517..2386780 (+) 264 Protein_2294 helix-turn-helix transcriptional regulator -
  QAO20_RS11690 (QAO20_11660) - 2386796..2387011 (+) 216 WP_001025405.1 MW1434 family type I TA system toxin -
  QAO20_RS11695 (QAO20_11665) - 2387000..2387329 (-) 330 WP_000128907.1 hypothetical protein -
  QAO20_RS11700 (QAO20_11670) - 2387380..2388129 (+) 750 WP_001148654.1 phage antirepressor KilAC domain-containing protein -
  QAO20_RS11705 (QAO20_11675) - 2388145..2388342 (+) 198 WP_001148862.1 hypothetical protein -
  QAO20_RS11710 (QAO20_11680) - 2388329..2388709 (-) 381 WP_000762521.1 DUF2513 domain-containing protein -
  QAO20_RS11715 (QAO20_11685) - 2388764..2389084 (+) 321 WP_001120197.1 DUF771 domain-containing protein -
  QAO20_RS11720 (QAO20_11690) - 2389081..2389242 (+) 162 WP_000066020.1 DUF1270 domain-containing protein -
  QAO20_RS11725 (QAO20_11695) - 2389337..2389597 (+) 261 WP_000291075.1 DUF1108 family protein -
  QAO20_RS11730 (QAO20_11700) - 2389605..2389841 (+) 237 WP_000802315.1 hypothetical protein -
  QAO20_RS11735 (QAO20_11705) - 2389834..2390313 (+) 480 WP_000002508.1 siphovirus Gp157 family protein -
  QAO20_RS11740 (QAO20_11710) - 2390313..2390951 (+) 639 WP_001043069.1 ERF family protein -
  QAO20_RS11745 (QAO20_11715) ssb 2390951..2391379 (+) 429 WP_000934782.1 single-stranded DNA-binding protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27017.58 Da        Isoelectric Point: 5.0545

>NTDB_id=746936 QAO20_RS11675 WP_001031454.1 2385671..2386384(-) (irvR) [Staphylococcus aureus strain IT-MSSA50]
MNKERNIIIAKNIRKFLNDSNMSQKKLAELINIKPSTLSDYLNLRSNPSHGVIQRIADVFEVGKSDIDTTYKDDNDITSI
YNKLTPPRQENVLNYANEQLEEQNSKGDNVVDINSYKQEKTPVNVNGCVSAGVGERLHDETLFTEMVKGPIPTHDLALKV
NGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKDYDDLHFYRNESVRLIGKVIL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=746936 QAO20_RS11675 WP_001031454.1 2385671..2386384(-) (irvR) [Staphylococcus aureus strain IT-MSSA50]
ATGAACAAAGAAAGAAATATTATTATAGCCAAAAACATTAGAAAATTTCTCAACGATTCAAATATGTCTCAAAAGAAACT
TGCTGAACTCATTAACATAAAACCATCTACTTTAAGCGATTATTTAAATTTACGTTCCAACCCCTCTCACGGCGTTATAC
AAAGGATAGCTGATGTTTTCGAGGTTGGTAAAAGCGACATAGATACTACATACAAAGACGATAACGACATCACTTCCATA
TACAACAAACTCACACCTCCCCGCCAAGAAAACGTACTTAACTATGCAAATGAACAATTGGAAGAACAGAATTCTAAAGG
AGATAACGTTGTAGATATTAATTCATATAAACAGGAGAAAACTCCAGTTAACGTCAATGGTTGCGTCTCTGCTGGTGTAG
GAGAACGTTTACACGATGAAACGCTATTTACTGAAATGGTTAAAGGACCTATCCCCACACACGATTTAGCGTTAAAAGTA
AATGGTGATTCTATGGAACCTATGTTTAAAGATGGCGAAATCATATTTGTGGAGAAAACTCACAATATAAAGAATGGACA
AATTGGTATATTCATCATTGAAGAAGAAGCGTACGTTAAGAAAGTCTTTGTTGAAGATGATAGATTGACTCTAGTTTCAC
TAAATAAAGATTACGACGATCTACACTTTTATAGAAATGAAAGTGTGAGGTTAATTGGAAAAGTTATTTTATAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(127-236)

Helix-turn-helix (HTH_3)

(13-63)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

33.929

100

0.401