Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   QAO20_RS04690 Genome accession   NZ_CP123106
Coordinates   966912..967586 (-) Length   224 a.a.
NCBI ID   WP_001166506.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IT-MSSA50     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 961912..972586
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAO20_RS04675 (QAO20_04650) - 963092..964981 (-) 1890 WP_000009399.1 FtsX-like permease family protein -
  QAO20_RS04680 (QAO20_04655) vraF 964971..965732 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  QAO20_RS04685 (QAO20_04660) graS 965879..966919 (-) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  QAO20_RS04690 (QAO20_04665) braR 966912..967586 (-) 675 WP_001166506.1 response regulator transcription factor GraR/ApsR Regulator
  QAO20_RS04695 (QAO20_04670) graX 967602..968525 (-) 924 WP_000802951.1 auxiliary protein GraX/ApsX -
  QAO20_RS04700 (QAO20_04675) - 968638..969144 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QAO20_RS04705 (QAO20_04680) - 969354..969782 (-) 429 WP_000198499.1 hypothetical protein -
  QAO20_RS04710 (QAO20_04685) - 970110..971153 (-) 1044 WP_001030761.1 alpha/beta hydrolase -
  QAO20_RS04715 (QAO20_04690) - 971304..972371 (-) 1068 WP_000980139.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.4019

>NTDB_id=746912 QAO20_RS04690 WP_001166506.1 966912..967586(-) (braR) [Staphylococcus aureus strain IT-MSSA50]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=746912 QAO20_RS04690 WP_001166506.1 966912..967586(-) (braR) [Staphylococcus aureus strain IT-MSSA50]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGGGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACACTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411